General Information: |
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Name(s) found: |
vps41 /
SPAP27G11.05c
[Sanger Pombe]
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Description(s) found:
Found 15 descriptions. SHOW ALL |
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Organism: | Schizosaccharomyces pombe |
Length: | 886 amino acids |
Gene Ontology: |
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Cellular Component: |
cytoplasm
[IDA]
HOPS complex [ISS] |
Biological Process: |
vacuole organization
[ISS]
vesicle docking [ISS] late endosome to vacuole transport [ISS] vacuole fusion, non-autophagic [ISS] protein targeting to vacuole [ISS] Golgi to endosome transport [ISS] |
Molecular Function: |
molecular_function
[ND]
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Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSVDESNSDS EIDSISSSDE DEEPKLIYER ITEKFQGCFM NDTISACAIS KEHFFFGSHN 60 61 GAIYIYQKNG ILLRKMILHS ASVVDLSVDL ESENLASCSM DGKMIISNIT TRETTVHDFK 120 121 RPLLSVAIDP YYSTRSSRQV LSGGRAGKVV LSEKGWLGNK DTVLQADCGA VYKISWYTTY 180 181 IAWASDLGIT VYSTEFGKVL GRLEPPKRLP NDEIFPYQLF WQSESRLVIG WSDQIMIVSI 240 241 QRSNVANELP KISLQALLEI DSIVSGVLML GFNILTLAYI ANVEDFTSAI PSQRIEGCRP 300 301 ELRLIDSSFK ELCGDAIGLA NYSRLQPSDY HLLPDPSSNS HSFVISPNDI VYVRERNQID 360 361 HVKYLVSKEM YAEAIDAVKK LPEIPPSLQI SELAKKYIFH LLGKGQYKEA GMVIPSLYND 420 421 NLAEWEQWVF VFAENDHLED IADFLPTGEN HLSPLVYEMI LAQYLATDER TFNKKLHEWP 480 481 TMLYSVSTIR NATLKKFKEN QKSSTLTESL AFLYLEDNMP IDAFHLYLKL HSELCIDLIL 540 541 QHNLYDEARA SVLLLMLISS KGKSSDTKSA MSSMLVQHVH SFPPQEVIMQ IHSVPQFLYE 600 601 YFCEFELMYP NSLMEYGDLK LDVFAEFDRK RFFDFLVNTQ CYSLDHAAQI CKQYNYLDEL 660 661 VYILGRMGNN KEALMLIINE LLDIGRAIRY VKEQADRELW DDLISYSLDK PEFICTLLEN 720 721 IGTDENARNL LSKIPPGTKL PHMKKSISKL LADHQSQVQL YQSCYKLFKN ESISMAIKYR 780 781 EQEQSGLEFL VKGKRSKNIF LTNLVKLDNP FNSFGDEQLD YNYRKRIPMI YDLRTKKYIR 840 841 PEDVRIDTDD VFKDDKIAYF KTRMHLKPEV QMRNKLDLLM MLYKQT |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..290] | 63.39794 | PAF-AH Holoenzyme: Lis1/Alfa2 | |
2 | View Details | [291..357] | N/A | No confident structure predictions are available. | |
3 | View Details | [358..886] | 85.69897 | Clathrin D6 Coat |
Functions predicted (by domain):
# | Gene Ontology predictions | ||||||||||||||||||||||||||||||||||||||||||||||||
1 |
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2 | No functions predicted. | ||||||||||||||||||||||||||||||||||||||||||||||||
3 | No functions predicted. |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.80 |
Source: Reynolds et al. (2008)