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Protein Overview: vps41

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..290] PSI-BLAST 63.39794 PAF-AH Holoenzyme: Lis1/Alfa2
2 View Details [291..357] deduced N/A No confident structure predictions are available.
3 View Details [358..886] PSI-BLAST 85.69897 Clathrin D6 Coat

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • cytoskeletal protein binding
  • 2.20122168933317 bayes_pls_golite062009
  • binding
  • 1.99637157021613 bayes_pls_golite062009
  • actin binding
  • 1.40054662654509 bayes_pls_golite062009
  • protein binding
  • 1.21879977456466 bayes_pls_golite062009
  • transporter activity
  • 1.21549336905926 bayes_pls_golite062009
  • tubulin binding
  • 1.10875870970504 bayes_pls_golite062009
  • microtubule binding
  • 1.03769395387791 bayes_pls_golite062009
  • substrate-specific transporter activity
  • 0.734793983890004 bayes_pls_golite062009
  • nucleic acid binding
  • 0.624115832843391 bayes_pls_golite062009
  • transcription repressor activity
  • 0.328276176504109 bayes_pls_golite062009
  • hydrolase activity
  • 0.28424525033024 bayes_pls_golite062009
  • transcription regulator activity
  • 0.282387003961579 bayes_pls_golite062009
  • dynein binding
  • 0.180120691665679 bayes_pls_golite062009
  • structural molecule activity
  • 0.0588151480189092 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
  • 0.00585398682921312 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle