YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: SPBC1685.05

General Information:
Name(s) found: SPBC1685.05 [Sanger Pombe]
Description(s) found:
SHOW ONLY BEST
  • pir||T39521 hypothetical signaling-associated PDZ domain containing protein SPBC1685.05 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74626843|sp|O74325.1|YH05_SCHPO RecName: Full=PDZ domain-containing protein C1685.05 [NCBI NR]
  • gi|3367788|emb|CAA20053.1| serine protease (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112001|ref|NP_595209.1| serine protease (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • serine protease [Sanger Pombe]
  • PDZ domain-containing protein C1685.05 OS=Schizosaccharomyces pombe GN=SPBC1685.05 PE=2 SV=1 [Swiss-Prot]
  • PUTATIVE SERINE PROTEASE: O74325; [pompepVF.fasta]
  • Hypothetical protein [pompep4896]
  • |||putative serine protease [pompepnew.fasta]
  • Serine protease (Predicted); non-essential (PMID 12618370); similar to S. cerevisiae YNL123W [4896.FASTAC]
  • |||serine protease (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • hypothetical protein [Schizosaccharomyces pombe]gi|3367788|emb|CAA20053.1| serine protease (predicted); non-essential (PMID 12618370); similar to S. cerevisiae YNL123W [Schizosaccharomyces pombe]gi|7491387|pir||T39521 hypothetical signaling-associated P [nrdb_11152004_Chlamydomonas]
  • |||serine protease |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O74325) Hypothetical protein [pompep4896_normal_reversed]
  • serine protease [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
  • SPBC1685.05 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • PDZ domain-containing protein C1685.05 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC1685.05 PE=4 SV=1 [uniprot_sprot.fasta.20160308]
    • Organism: Schizosaccharomyces pombe
    Length: 997 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDALink to PubMed article]
    Biological Process: proteolysis [ISSLink to PubMed article]
    proteolysis involved in cellular protein catabolic process [NAS]
    Molecular Function: serine-type endopeptidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTPVSSDYRP NHIFLPKFRP DKITSECNTP QQQNVIAEGL YNVSEPFPIR NTDEERYLDT  60
   61 KEIHHTWDNT IKNVVRSIVS IKGSALRSFD TESAGSFCAT GFVVNKTLGL ILSNRHVVSP 120
  121 GPISARASFI NYEEIDIYPI YRDPVHDFGF FRYDPSSIRF HDVTEISLSP ESAKVGIDIR 180
  181 IIGNDAGEKL SILSSTLARL DRPAPNYGID NYNDFNTFYY QAASGTSGGS SGSPVLDISG 240
  241 AAVALNSGGS NSSASSFYLP LDRVVRALRC IENNTPITRG TLLTEFLHWS YDELSRIGLP 300
  301 REFEYDCRTR VPSSTGLLVV SRVLRNSEVS KALEPGDILI AFKTDSHKST YIVDFVSLFE 360
  361 VLDEMVGKTI ELHVYRPKRG FLTFQLTVQD LHNVTPSRFL EVGGAVLHDL SYQLARSYQF 420
  421 SLNSGTYVAS SGMLNWSSGT RDFLVTRLAN KPTPTLDAFI DVLVQLTDNA RVPMHFRVLG 480
  481 KYEEEFTIVT VDRHFFLASI FSRNDEKGTW DRQSLPPPQP SISRRPSVIP RPQEGSKSME 540
  541 AIQNALVLVH CRMPYSINGF SSTKLYSGTG VIVSVVPPLI VVDRSVIPVD ICDIRLTFQS 600
  601 MSAMGHLTFL DNRIAVVSCD YLPSNSVQLN FVADFLRTGD ECTLAALDED LQLLTKKTTV 660
  661 RSVSVVETER SSPPRFRYVN CEVISLMDSL ASTGGLVFRE VGDDREIVAL WISVVHQDVG 720
  721 GKDYTTKYGL SMSYILPVLE RLKLPPSARA QHVPTTAGVE WSHITLAGAS TLGLSQTRSS 780
  781 EFYMKSRENG TIPRPLYVIS HLRPLLHKTS LGVGDILLEV NGKMITRLSD LHEFETESEI 840
  841 KAVILRDGIE MEITIPLYPE YPTFSSRAIC WMGAIIHPTH SSVFEQVEPD VDLPGPEGVY 900
  901 VGSILYGSPA LNMLRAAHWI VAVDGHDINT FDDFYHMLLE KPTDTFVQVK QMNRRGATSI 960
  961 VSVRPDPLFW PTCIIERDSN GRWCTKHLQR KTKEVCS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..62] MSA 1.324996 View MSA. No confident structure predictions are available.
    2 View Details [63..395] PSI-BLAST 39.69897 Crystal Structure of RV0983 from Mycobacterium tuberculosis- Proteolytically active form
    3 View Details [396..493] PSI-BLAST 6.0 Structural Insights into the Inter-domain Chaperoning of Tandem PDZ Domains in Glutamate Receptor Interacting Proteins
    4 View Details [494..997] PSI-BLAST 73.522879 Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • peptidase activity
    		•  4.29457766519035 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.89864153190117 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.83715255212076 bayes_pls_golite062009
  • serine hydrolase activity
    		•  3.10188179747851 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  3.09356744910628 bayes_pls_golite062009
  • hydrolase activity
    		•  2.95731933344861 bayes_pls_golite062009
  • serine-type endopeptidase activity
    		•  2.91265669601085 bayes_pls_golite062009
  • catalytic activity
    		•  1.40927913545237 bayes_pls_golite062009
  • protein binding
    		•  1.32810553079123 bayes_pls_golite062009
  • binding
    		•  0.714540979086077 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.51799784310141 bayes_pls_golite062009
  • protein C-terminus binding
    		•  0.285650646146901 bayes_pls_golite062009
  • DNA binding
    		•  0.166098452144962 bayes_pls_golite062009
  • enzyme binding
    		•  0.0323607861080599 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • peptidase activity
    		•  4.29457766519035 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.89864153190117 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.83715255212076 bayes_pls_golite062009
  • serine hydrolase activity
    		•  3.10188179747851 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  3.09356744910628 bayes_pls_golite062009
  • hydrolase activity
    		•  2.95731933344861 bayes_pls_golite062009
  • serine-type endopeptidase activity
    		•  2.91265669601085 bayes_pls_golite062009
  • catalytic activity
    		•  1.40927913545237 bayes_pls_golite062009
  • protein binding
    		•  1.32810553079123 bayes_pls_golite062009
  • binding
    		•  0.714540979086077 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.51799784310141 bayes_pls_golite062009
  • protein C-terminus binding
    		•  0.285650646146901 bayes_pls_golite062009
  • DNA binding
    		•  0.166098452144962 bayes_pls_golite062009
  • enzyme binding
    		•  0.0323607861080599 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle