| Protein: | SPBC1685.05 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 997 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC1685.05.
| Description | E-value | Query Range |
Subject Range |
|
|
456.0 | [0..57] | [994..61] |
|
|
453.0 | [0..56] | [994..186] |
|
|
453.0 | [0..56] | [993..490] |
|
|
451.0 | [0..55] | [995..66] |
|
|
449.0 | [0..5] | [991..8] |
|
|
448.0 | [0..67] | [994..180] |
|
|
447.0 | [0..45] | [994..30] |
|
|
446.0 | [0..16] | [992..18] |
|
|
445.0 | [0..56] | [994..59] |
|
|
437.0 | [0..58] | [994..208] |
|
Region A: Residues: [1-62] |
1 11 21 31 41 51
| | | | | |
1 MTPVSSDYRP NHIFLPKFRP DKITSECNTP QQQNVIAEGL YNVSEPFPIR NTDEERYLDT 60
61 KE
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [63-395] |
1 11 21 31 41 51
| | | | | |
1 IHHTWDNTIK NVVRSIVSIK GSALRSFDTE SAGSFCATGF VVNKTLGLIL SNRHVVSPGP 60
61 ISARASFINY EEIDIYPIYR DPVHDFGFFR YDPSSIRFHD VTEISLSPES AKVGIDIRII 120
121 GNDAGEKLSI LSSTLARLDR PAPNYGIDNY NDFNTFYYQA ASGTSGGSSG SPVLDISGAA 180
181 VALNSGGSNS SASSFYLPLD RVVRALRCIE NNTPITRGTL LTEFLHWSYD ELSRIGLPRE 240
241 FEYDCRTRVP SSTGLLVVSR VLRNSEVSKA LEPGDILIAF KTDSHKSTYI VDFVSLFEVL 300
301 DEMVGKTIEL HVYRPKRGFL TFQLTVQDLH NVT
|
| Detection Method: | |
| Confidence: | 39.69897 |
| Match: | 1y8tA |
| Description: | Crystal Structure of RV0983 from Mycobacterium tuberculosis- Proteolytically active form |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.29457766519035 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.89864153190117 | bayes_pls_golite062009 |
| endopeptidase activity | 3.83715255212076 | bayes_pls_golite062009 |
| serine hydrolase activity | 3.10188179747851 | bayes_pls_golite062009 |
| serine-type peptidase activity | 3.09356744910628 | bayes_pls_golite062009 |
| hydrolase activity | 2.95731933344861 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 2.91265669601085 | bayes_pls_golite062009 |
| catalytic activity | 1.40927913545237 | bayes_pls_golite062009 |
| protein binding | 1.32810553079123 | bayes_pls_golite062009 |
| binding | 0.714540979086077 | bayes_pls_golite062009 |
| nucleic acid binding | 0.51799784310141 | bayes_pls_golite062009 |
| protein C-terminus binding | 0.285650646146901 | bayes_pls_golite062009 |
| DNA binding | 0.166098452144962 | bayes_pls_golite062009 |
| enzyme binding | 0.0323607861080599 | bayes_pls_golite062009 |
|
Region A: Residues: [396-493] |
1 11 21 31 41 51
| | | | | |
1 PSRFLEVGGA VLHDLSYQLA RSYQFSLNSG TYVASSGMLN WSSGTRDFLV TRLANKPTPT 60
61 LDAFIDVLVQ LTDNARVPMH FRVLGKYEEE FTIVTVDR
|
| Detection Method: | |
| Confidence: | 6.0 |
| Match: | 1p1dA |
| Description: | Structural Insights into the Inter-domain Chaperoning of Tandem PDZ Domains in Glutamate Receptor Interacting Proteins |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [494-997] |
1 11 21 31 41 51
| | | | | |
1 HFFLASIFSR NDEKGTWDRQ SLPPPQPSIS RRPSVIPRPQ EGSKSMEAIQ NALVLVHCRM 60
61 PYSINGFSST KLYSGTGVIV SVVPPLIVVD RSVIPVDICD IRLTFQSMSA MGHLTFLDNR 120
121 IAVVSCDYLP SNSVQLNFVA DFLRTGDECT LAALDEDLQL LTKKTTVRSV SVVETERSSP 180
181 PRFRYVNCEV ISLMDSLAST GGLVFREVGD DREIVALWIS VVHQDVGGKD YTTKYGLSMS 240
241 YILPVLERLK LPPSARAQHV PTTAGVEWSH ITLAGASTLG LSQTRSSEFY MKSRENGTIP 300
301 RPLYVISHLR PLLHKTSLGV GDILLEVNGK MITRLSDLHE FETESEIKAV ILRDGIEMEI 360
361 TIPLYPEYPT FSSRAICWMG AIIHPTHSSV FEQVEPDVDL PGPEGVYVGS ILYGSPALNM 420
421 LRAAHWIVAV DGHDINTFDD FYHMLLEKPT DTFVQVKQMN RRGATSIVSV RPDPLFWPTC 480
481 IIERDSNGRW CTKHLQRKTK EVCS
|
| Detection Method: | |
| Confidence: | 73.522879 |
| Match: | 1ky9A |
| Description: | Protease Do (DegP, HtrA), C-terminal domains; Protease Do (DegP, HtrA), catalytic domain |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| peptidase activity | 4.29457766519035 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 3.89864153190117 | bayes_pls_golite062009 |
| endopeptidase activity | 3.83715255212076 | bayes_pls_golite062009 |
| serine hydrolase activity | 3.10188179747851 | bayes_pls_golite062009 |
| serine-type peptidase activity | 3.09356744910628 | bayes_pls_golite062009 |
| hydrolase activity | 2.95731933344861 | bayes_pls_golite062009 |
| serine-type endopeptidase activity | 2.91265669601085 | bayes_pls_golite062009 |
| catalytic activity | 1.40927913545237 | bayes_pls_golite062009 |
| protein binding | 1.32810553079123 | bayes_pls_golite062009 |
| binding | 0.714540979086077 | bayes_pls_golite062009 |
| nucleic acid binding | 0.51799784310141 | bayes_pls_golite062009 |
| protein C-terminus binding | 0.285650646146901 | bayes_pls_golite062009 |
| DNA binding | 0.166098452144962 | bayes_pls_golite062009 |
| enzyme binding | 0.0323607861080599 | bayes_pls_golite062009 |
