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Protein Overview: fft1

General Information:
Name(s) found: fft1 / SPAC20G8.08c [Sanger Pombe]
Description(s) found:
Found 18 descriptions.
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  • fun thirty related protein Fft1 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 944 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ICLink to PubMed article][IDALink to PubMed article]
    nuclear chromatin [IC]
    chromatin remodeling complex [ISSLink to PubMed article]
    Biological Process: chromatin remodeling [ISSLink to PubMed article]
    Molecular Function: ATP binding [ISSLink to PubMed article]
    DNA binding [IEA]
    ATP-dependent DNA helicase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKRKDNKELI CIPSSSPPST PIREENYYLL TSSPIECSPI QQLDLSGSFK NYSTTSSRAN  60
   61 GKKFGQLAMQ SRIFFDTTDH KKYVESSYAA YDPHDQPPER DVSLKESSNK INPSNFFDSE 120
  121 QITKINAVKK RFPALDSEMI IATLEKFNWR ENITIHKLTF QKLLGRGNST INKSAQKLNN 180
  181 QPIEKSSVDK ENAKRKRYVE EGTKQGQKKK PLRVIELSDE ETNEDDLLGQ SPTACTTDAN 240
  241 IDNSIPENSD KIEEVSIESS GPSEVEDEMS EYDVRVLNFL NESTLQEIVE VSGCESKVVE 300
  301 YFISKRPFPS LEKAEALCQR NAHAATGKRK KSDGRNVGRK LVNSTYEVLQ GFDAVDSLIA 360
  361 KCERYGAMIS NTMRSWHNLF DDKKMEQFLN TSTGSISYEY NSQQPSSIAS GITLKSYQIV 420
  421 GLNWLCLMYK AKLSGILADE MGLGKTCQVI SFLASLKEKG IQNRHLVVVP SSTLGNWLRE 480
  481 FEKFCPSLRV ESYSGTQSER INKRYYLMDT DFDVLVTTYQ LASGSRDDRS FLRKQRFDIS 540
  541 IFDEGHYLKN RMSERYKHLM NIPANFRLLI TGTPLQNNLK ELISLLAFML PKVFDNNMQG 600
  601 LDIIYKIKTT SDGDIERAYL SQERISRAKT IMNPFILRRR KENVLSDLPP KIQHVEYCHM 660
  661 EETQLSLYLS VLELKNLVNA NRENILMQLR KAALHQLLFR SQYNLETLSL MSKRILREDA 720
  721 YLDANPQYIF EDMEVMSDFE LHKLADQYRH LHPFALKGKP WMDSAKVKKL CSLLKKSRPN 780
  781 ERILIFSQFT QVLDILEYVL NTLDLEFLRL DGSTPVETRQ QLIDDFHTNE NYKVFLLSTK 840
  841 SGGFGINLTC ANIVILFDCS FNPFDDMQAE DRAHRVGQTR PVHVYRLITK NTIEENIRRL 900
  901 ANTKLTLESS LTTDSEKIQK EISGELMKSL QMDGRVDTMD GSVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..208] deduced N/A No confident structure predictions are available.
    2 View Details [209..292] deduced N/A No confident structure predictions are available.
    3 View Details [293..401] PSI-BLAST 4.0 Crystal structure of the UvsW helicase from Bacteriophage T4
    4 View Details [402..944] PSI-BLAST 83.39794 Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4
    Term Confidence Notes
  • DNA-dependent ATPase activity
    		•  2.58390156971125 bayes_pls_golite062009
  • binding
    		•  2.4974940028864 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.94405657559372 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.87046999221652 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.85030653553169 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.84811666933472 bayes_pls_golite062009
  • DNA helicase activity
    		•  1.72320119360938 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
    		•  1.52935820732225 bayes_pls_golite062009
  • helicase activity
    		•  1.33212695797068 bayes_pls_golite062009
  • motor activity
    		•  1.14667913749579 bayes_pls_golite062009
  • histone acetyltransferase activity
    		•  1.05990253628867 bayes_pls_golite062009
  • lysine N-acetyltransferase activity
    		•  1.05990253628867 bayes_pls_golite062009
  • hydrolase activity
    		•  0.985656549643169 bayes_pls_golite062009
  • purine NTP-dependent helicase activity
    		•  0.89390151223569 bayes_pls_golite062009
  • ATP-dependent helicase activity
    		•  0.89390151223569 bayes_pls_golite062009
  • protein-DNA loading ATPase activity
    		•  0.707571682109441 bayes_pls_golite062009
  • microtubule motor activity
    		•  0.60036517876321 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.579644950922817 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.500462538667228 bayes_pls_golite062009
  • catalytic activity
    		•  0.458437698837681 bayes_pls_golite062009
  • protein binding
    		•  0.378225828131122 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.370109410491501 bayes_pls_golite062009
  • nucleotide binding
    		•  0.367488441096941 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.348507955395744 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.348454114797054 bayes_pls_golite062009
  • DNA clamp loader activity
    		•  0.229994987891881 bayes_pls_golite062009
  • double-stranded DNA binding
    		•  0.2192434828134 bayes_pls_golite062009
  • actin binding
    		•  0.00482938540552702 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle