| Protein: | fft1 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 944 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for fft1.
| Description | E-value | Query Range |
Subject Range |
|
|
472.0 | [0..2] | [931..347] |
|
|
460.0 | [0..2] | [942..345] |
|
|
457.0 | [0..2] | [942..347] |
|
|
456.0 | [0..2] | [942..347] |
|
|
455.0 | [0..2] | [942..347] |
|
|
452.0 | [0..2] | [942..347] |
|
Region A: Residues: [1-208] |
1 11 21 31 41 51
| | | | | |
1 MKRKDNKELI CIPSSSPPST PIREENYYLL TSSPIECSPI QQLDLSGSFK NYSTTSSRAN 60
61 GKKFGQLAMQ SRIFFDTTDH KKYVESSYAA YDPHDQPPER DVSLKESSNK INPSNFFDSE 120
121 QITKINAVKK RFPALDSEMI IATLEKFNWR ENITIHKLTF QKLLGRGNST INKSAQKLNN 180
181 QPIEKSSVDK ENAKRKRYVE EGTKQGQK
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [209-292] |
1 11 21 31 41 51
| | | | | |
1 KKPLRVIELS DEETNEDDLL GQSPTACTTD ANIDNSIPEN SDKIEEVSIE SSGPSEVEDE 60
61 MSEYDVRVLN FLNESTLQEI VEVS
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [293-401] |
1 11 21 31 41 51
| | | | | |
1 GCESKVVEYF ISKRPFPSLE KAEALCQRNA HAATGKRKKS DGRNVGRKLV NSTYEVLQGF 60
61 DAVDSLIAKC ERYGAMISNT MRSWHNLFDD KKMEQFLNTS TGSISYEYN
|
| Detection Method: | |
| Confidence: | 4.0 |
| Match: | 1rifA |
| Description: | Crystal structure of the UvsW helicase from Bacteriophage T4 |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [402-944] |
1 11 21 31 41 51
| | | | | |
1 SQQPSSIASG ITLKSYQIVG LNWLCLMYKA KLSGILADEM GLGKTCQVIS FLASLKEKGI 60
61 QNRHLVVVPS STLGNWLREF EKFCPSLRVE SYSGTQSERI NKRYYLMDTD FDVLVTTYQL 120
121 ASGSRDDRSF LRKQRFDISI FDEGHYLKNR MSERYKHLMN IPANFRLLIT GTPLQNNLKE 180
181 LISLLAFMLP KVFDNNMQGL DIIYKIKTTS DGDIERAYLS QERISRAKTI MNPFILRRRK 240
241 ENVLSDLPPK IQHVEYCHME ETQLSLYLSV LELKNLVNAN RENILMQLRK AALHQLLFRS 300
301 QYNLETLSLM SKRILREDAY LDANPQYIFE DMEVMSDFEL HKLADQYRHL HPFALKGKPW 360
361 MDSAKVKKLC SLLKKSRPNE RILIFSQFTQ VLDILEYVLN TLDLEFLRLD GSTPVETRQQ 420
421 LIDDFHTNEN YKVFLLSTKS GGFGINLTCA NIVILFDCSF NPFDDMQAED RAHRVGQTRP 480
481 VHVYRLITKN TIEENIRRLA NTKLTLESSL TTDSEKIQKE ISGELMKSLQ MDGRVDTMDG 540
541 SVV
|
| Detection Method: | |
| Confidence: | 83.39794 |
| Match: | 1z3iX |
| Description: | Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| DNA-dependent ATPase activity | 2.58390156971125 | bayes_pls_golite062009 |
| binding | 2.4974940028864 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 1.94405657559372 | bayes_pls_golite062009 |
| pyrophosphatase activity | 1.87046999221652 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 1.85030653553169 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 1.84811666933472 | bayes_pls_golite062009 |
| DNA helicase activity | 1.72320119360938 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.52935820732225 | bayes_pls_golite062009 |
| helicase activity | 1.33212695797068 | bayes_pls_golite062009 |
| motor activity | 1.14667913749579 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 1.05990253628867 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 1.05990253628867 | bayes_pls_golite062009 |
| hydrolase activity | 0.985656549643169 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 0.89390151223569 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 0.89390151223569 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 0.707571682109441 | bayes_pls_golite062009 |
| microtubule motor activity | 0.60036517876321 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.579644950922817 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 0.500462538667228 | bayes_pls_golite062009 |
| catalytic activity | 0.458437698837681 | bayes_pls_golite062009 |
| protein binding | 0.378225828131122 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.370109410491501 | bayes_pls_golite062009 |
| nucleotide binding | 0.367488441096941 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.348507955395744 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.348454114797054 | bayes_pls_golite062009 |
| DNA clamp loader activity | 0.229994987891881 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.2192434828134 | bayes_pls_golite062009 |
| actin binding | 0.00482938540552702 | bayes_pls_golite062009 |
