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Protein Overview: SPBC19C7.11

General Information:
Name(s) found: SPBC19C7.11 [Sanger Pombe]
Description(s) found:
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  • pir||T39817 hypothetical protein SPBC19C7.11 - fission yeast (Schizosaccharomyces pombe) [NCBI NR]
  • gi|74626798|sp|O60159.1|YHYB_SCHPO RecName: Full=Uncharacterized chloride channel protein C19C7.11 [NCBI NR]
  • gi|3218415|emb|CAA19579.1| ClC chloride channel (predicted) [Schizosaccharomyces pombe] [NCBI NR]
  • gi|19112959|ref|NP_596167.1| ClC chloride channel (predicted) [Schizosaccharomyces pombe 972h-] [NCBI NR]
  • ClC chloride channel [Sanger Pombe]
  • Uncharacterized chloride channel protein C19C7.11 OS=Schizosaccharomyces pombe GN=SPBC19C7.11 PE=2 SV=1 [Swiss-Prot]
  • CLC CHLORIDE CHANNEL: O60159; [pompepVF.fasta]
  • Chloride channel [pompep4896]
  • |||ClC chloride channel [pompepnew.fasta]
  • SPBC19C7.11 protein [4896.FASTAC]
  • |||ClC chloride channel (predicted)|Schizosaccharomyces pombe|chr 2|||Manual [pombe041504.fasta]
  • chloride channel [Schizosaccharomyces pombe]gi|3218415|emb|CAA19579.1| SPBC19C7.11 [Schizosaccharomyces pombe]gi|7491472|pir||T39817 hypothetical protein SPBC19C7.11 - fission yeast (Schizosaccharomyces pombe) [nrdb_11152004_Chlamydomonas]
  • |||ClC chloride channel |Schizosaccharomyces pombe|chr 2|||Manual [pompep2242005.fasta]
  • (O60159) Chloride channel [pompep4896_normal_reversed]
  • SPBC19C7.11 [Schizosaccharomyces pombe] [nr-271106-contam.fasta]
  • hypothetical protein SPBC19C7.11 [Schizosaccharomyces pombe 972h-] [nr-271106-contam.fasta]
    • Organism: Schizosaccharomyces pombe
    Length: 812 amino acids

    Gene Ontology:
    Cellular Component: chloride channel complex [IEA]
    endosome [ISSLink to PubMed article]
    membrane [IEA]
    integral to membrane [IEA]
    Golgi apparatus [ISSLink to PubMed article]
    Biological Process: transmembrane transport [IEA]
    cellular cation homeostasis [ISSLink to PubMed article]
    chloride transport [ICLink to PubMed article]
    Molecular Function: chloride ion binding [IEA]
    voltage-gated chloride channel activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSQKRADSS SSFDQAERRS LDENERKKKY FFNREGSGID NFETDGMVFQ ASKAFDYYLL  60
   61 TTFKDRVNEI INEQNEENVI DQSRWSKLWR IWNVGYSWFI LSIIGTTVGF AAYMLDIVTS 120
  121 WLSDIRRGYC TSHWYYNEKF CCWYSETMGM FKHDLYNDLT FQGSSCTAWK PWTYKFSLNY 180
  181 LIYTAFALLF VLCAAIMVRD VAPLAAGSGI SEIKCIISGF LRDSFLSFRV MLVKCVGLPL 240
  241 AIASGLSVGK EGPSVHLATT IGHNISKIFK YAREGSIRYR DICVASAASG VAVAFGSPIG 300
  301 GVLFGIEVGK FIEILTNSFK EMSGGYDPKM IVYSFFCCLS AVGVLHMLNP FRTGQVVLFE 360
  361 VRYSGSWHFF ELLFFCFLGI FGGLYGEFVM RLFFLIQKLR KKYLSRWGVL DAAFVTVITS 420
  421 LVSFLNPWLR LDMTLGMELL FQECKSSSSP ELINLCDPSL RTKNTILLLI ATFARTIFVT 480
  481 FSYGAKVPAG IFVPSMAVGA SFGYMIGLIA EMIYQRFPNS VLFLACHGSE SCITPGTYAL 540
  541 LGAAASLSGI MHLTVTIVVI MFELTGALNF ILPTVLVVAL ANSIGNMLGK TGIADRSIEI 600
  601 NGLPLLEPEK SINSSNTINI PITEVMASNL ITIPSIGFTW RKLLGMMEGY DFSGYPVVLD 660
  661 SRSNYLIGYL KKSSLKSSFE AAKLEPSFTF DQQLCFGKVD SVGDSKSSKF GESDRIDLSA 720
  721 YMDVNPISVL HTQSIANVAV LFEVLSPSVI FIEKDGNLVG LISKKDLLLA SKYYQEDNDL 780
  781 VNPANRHRAV STERINDSYE NIELKPLKLN IE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] MSA 2.16499 View MSA. No confident structure predictions are available.
    2 View Details [94..607] PSI-BLAST 56.522879 Clc chloride channel
    3 View Details [608..812] PSI-BLAST 26.69897 Crystal structure of Inosine-5'-monophosphate dehydrogenase (TM1347) from THERMOTOGA MARITIMA at 2.18 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • anion channel activity
    		•  6.77290758049983 bayes_pls_golite062009
  • chloride channel activity
    		•  6.77290758049983 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  6.08111514985329 bayes_pls_golite062009
  • voltage-gated chloride channel activity
    		•  5.99544422864122 bayes_pls_golite062009
  • voltage-gated anion channel activity
    		•  5.99544422864122 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  5.07840957725271 bayes_pls_golite062009
  • ion channel activity
    		•  4.93164650815682 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  4.81149777353187 bayes_pls_golite062009
  • channel activity
    		•  4.78965126968592 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  4.78965126968592 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.67227438984104 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  4.27956097534048 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  4.255638017629 bayes_pls_golite062009
  • gated channel activity
    		•  4.1072949331811 bayes_pls_golite062009
  • transporter activity
    		•  2.94995161862691 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.84443650880263 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.82470397063503 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle