| Protein: | SPBC19C7.11 |
| Organism: | Schizosaccharomyces pombe |
| Length: | 812 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for SPBC19C7.11.
| Description | E-value | Query Range |
Subject Range |
|
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517.0 | [0..26] | [780..8] |
|
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515.0 | [0..30] | [778..57] |
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515.0 | [0..30] | [780..898] |
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515.0 | [0..30] | [778..57] |
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514.0 | [0..30] | [778..57] |
|
|
513.0 | [0..30] | [778..30] |
|
Region A: Residues: [1-93] |
1 11 21 31 41 51
| | | | | |
1 MSSQKRADSS SSFDQAERRS LDENERKKKY FFNREGSGID NFETDGMVFQ ASKAFDYYLL 60
61 TTFKDRVNEI INEQNEENVI DQSRWSKLWR IWN
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [94-607] |
1 11 21 31 41 51
| | | | | |
1 VGYSWFILSI IGTTVGFAAY MLDIVTSWLS DIRRGYCTSH WYYNEKFCCW YSETMGMFKH 60
61 DLYNDLTFQG SSCTAWKPWT YKFSLNYLIY TAFALLFVLC AAIMVRDVAP LAAGSGISEI 120
121 KCIISGFLRD SFLSFRVMLV KCVGLPLAIA SGLSVGKEGP SVHLATTIGH NISKIFKYAR 180
181 EGSIRYRDIC VASAASGVAV AFGSPIGGVL FGIEVGKFIE ILTNSFKEMS GGYDPKMIVY 240
241 SFFCCLSAVG VLHMLNPFRT GQVVLFEVRY SGSWHFFELL FFCFLGIFGG LYGEFVMRLF 300
301 FLIQKLRKKY LSRWGVLDAA FVTVITSLVS FLNPWLRLDM TLGMELLFQE CKSSSSPELI 360
361 NLCDPSLRTK NTILLLIATF ARTIFVTFSY GAKVPAGIFV PSMAVGASFG YMIGLIAEMI 420
421 YQRFPNSVLF LACHGSESCI TPGTYALLGA AASLSGIMHL TVTIVVIMFE LTGALNFILP 480
481 TVLVVALANS IGNMLGKTGI ADRSIEINGL PLLE
|
| Detection Method: | |
| Confidence: | 56.522879 |
| Match: | 1kplA |
| Description: | Clc chloride channel |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| anion channel activity | 6.77290758049983 | bayes_pls_golite062009 |
| chloride channel activity | 6.77290758049983 | bayes_pls_golite062009 |
| anion transmembrane transporter activity | 6.08111514985329 | bayes_pls_golite062009 |
| voltage-gated chloride channel activity | 5.99544422864122 | bayes_pls_golite062009 |
| voltage-gated anion channel activity | 5.99544422864122 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 5.07840957725271 | bayes_pls_golite062009 |
| ion channel activity | 4.93164650815682 | bayes_pls_golite062009 |
| substrate-specific channel activity | 4.81149777353187 | bayes_pls_golite062009 |
| channel activity | 4.78965126968592 | bayes_pls_golite062009 |
| passive transmembrane transporter activity | 4.78965126968592 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 4.67227438984104 | bayes_pls_golite062009 |
| voltage-gated ion channel activity | 4.27956097534048 | bayes_pls_golite062009 |
| voltage-gated channel activity | 4.255638017629 | bayes_pls_golite062009 |
| gated channel activity | 4.1072949331811 | bayes_pls_golite062009 |
| transporter activity | 2.94995161862691 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.84443650880263 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.82470397063503 | bayes_pls_golite062009 |
|
Region A: Residues: [608-812] |
1 11 21 31 41 51
| | | | | |
1 PEKSINSSNT INIPITEVMA SNLITIPSIG FTWRKLLGMM EGYDFSGYPV VLDSRSNYLI 60
61 GYLKKSSLKS SFEAAKLEPS FTFDQQLCFG KVDSVGDSKS SKFGESDRID LSAYMDVNPI 120
121 SVLHTQSIAN VAVLFEVLSP SVIFIEKDGN LVGLISKKDL LLASKYYQED NDLVNPANRH 180
181 RAVSTERIND SYENIELKPL KLNIE
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| Detection Method: | |
| Confidence: | 26.69897 |
| Match: | 1vrdA |
| Description: | Crystal structure of Inosine-5'-monophosphate dehydrogenase (TM1347) from THERMOTOGA MARITIMA at 2.18 A resolution |
Matching Structure (courtesy of the PDB): |
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