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Protein Overview: psf2

General Information:
Name(s) found: psf2 / SPBC725.13c [Sanger Pombe]
Description(s) found:
Found 19 descriptions.
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  • GINS complex subunit Psf2 [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 183 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed articleLink to PubMed articleLink to PubMed article]
    DNA replication preinitiation complex [IC]
    nuclear replication fork [IC]
    GINS complex [TASLink to PubMed article]
    cytosol [IDALink to PubMed article]
    Biological Process: DNA replication initiation [IMPLink to PubMed article]
    DNA strand elongation involved in DNA replication [TASLink to PubMed article]
    GINS complex assembly [IMPLink to PubMed article]
    DNA-dependent DNA replication [IMPLink to PubMed article]
    meiotic chromosome segregation [IMPLink to PubMed article]
    mitotic sister chromatid segregation [IGILink to PubMed article]
    protein localization in nucleus [IMPLink to PubMed article]
    cellular protein localization [IGILink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALPRELEIS FSPEEMEFLA GNEYINIVPS ETMDQLPLVS ATIPIMKPPK KCRVPLWLAL  60
   61 ELKKQNLARI VPPEWMEIGK LENIRDDELE NETFSELPFR WLETAHLLLN FCADDIEDVE 120
  121 DIRRILLDIR EARQSKARTG LEAINEVQLT LDNLGAMEIN EIRPIFREVM DRMRKIVQVS 180
  181 QEE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..183] PSI-BLAST 67.39794 No description for 2q9qA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3'-5' DNA helicase activity
    		•  3.30007058745861 bayes_pls_golite062009
  • DNA helicase activity
    		•  2.7662250039458 bayes_pls_golite062009
  • binding
    		•  1.86366637427031 bayes_pls_golite062009
  • protein binding
    		•  1.52285169518311 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.2336233528067 bayes_pls_golite062009
  • helicase activity
    		•  1.2110072302388 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.406116199163083 bayes_pls_golite062009
  • transcription elongation regulator activity
    		•  0.37490315580617 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.350000641617868 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.33576520693158 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.333445385039412 bayes_pls_golite062009
  • catalytic activity
    		•  0.161911144249814 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle