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Protein Overview: SPBC887.02

General Information:
Name(s) found: SPBC887.02 [Sanger Pombe]
Description(s) found:
Found 15 descriptions.
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  • ClC chloride channel [Sanger Pombe]
    • Organism: Schizosaccharomyces pombe
    Length: 667 amino acids

    Gene Ontology:
    Cellular Component: chloride channel complex [IEA]
    integral to membrane [ISS]
    Biological Process: transmembrane transport [IEA]
    chloride transport [ISS]
    Molecular Function: chloride ion binding [IEA]
    voltage-gated chloride channel activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKDDQLIDWI HERYEEQKSA NRLAGRFRFL GLETKYSIIS IISGIFIGLT AALLNALASL  60
   61 LNSFREGYCT VNILFDKQTC CSTLTEDYEC QEFFFWRNNH SVFVSCLIYV SVSVGFAFIA 120
  121 TTLGYVVAPA ARASGIPTIK AILSGYKYPD MNVFFSIKTL CSKSLAVCFS VASGLWVGKE 180
  181 GPFVHIATNI IYLVERIAPS LADSEIFTRQ LLAAAMASGI AASFNAPVGG VIFALEQLAS 240
  241 SSFPSLFTGS IWYEFLCSAS SVVALQLIRS WHTDVGYLSY VSLDRRWSYK DTLPFIFISI 300
  301 LCGCLGSVLI YLNMKFASKT KGFSKISNVF FVIFLSLITS LTAYAILGES ELLFNPMELF 360
  361 PQVINSCSPS SSTVLCETTF WVTAIVLFTS ALLGLLLTSA TFGAAIPTGI IVPSLAIGAC 420
  421 IGRAVGTLLK SRFPSLAGTS IYGVIGSIAF LSSTTRLVVA LVVILFELTG ALNIALPLML 480
  481 ATLISKWVSD SIIETSIYDA WIQFRNIPYF PSSNSLKFSI PLNFPVRSPE QLVRLPIRSC 540
  541 SIEELERAMH DSSQSFFVVL KNDTEFFEGF ISRNKVSELL NRRPMSSNMQ TTDNTGLDPL 600
  601 RSASAPVDST FDLFDYIHPT TFTLNYDTPP VLMLKLFKDA GITNLALLNH GKLHGVLTKI 660
  661 VCFICTI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..492] PSI-BLAST 54.154902 Clc chloride channel
    2 View Details [493..667] PSI-BLAST 8.69897 No description for 2ooxG was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • anion channel activity
    		•  6.77290758049983 bayes_pls_golite062009
  • chloride channel activity
    		•  6.77290758049983 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  6.08111514985329 bayes_pls_golite062009
  • voltage-gated chloride channel activity
    		•  5.99544422864122 bayes_pls_golite062009
  • voltage-gated anion channel activity
    		•  5.99544422864122 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  5.07840957725271 bayes_pls_golite062009
  • ion channel activity
    		•  4.93164650815682 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  4.81149777353187 bayes_pls_golite062009
  • channel activity
    		•  4.78965126968592 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  4.78965126968592 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  4.67227438984104 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  4.27956097534048 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  4.255638017629 bayes_pls_golite062009
  • gated channel activity
    		•  4.1072949331811 bayes_pls_golite062009
  • transporter activity
    		•  2.94995161862691 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.84443650880263 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.82470397063503 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle