General Information: |
|
Name(s) found: |
prp19 /
SPAC29A4.08c
[Sanger Pombe]
|
Description(s) found:
Found 19 descriptions. SHOW ALL |
|
Organism: | Schizosaccharomyces pombe |
Length: | 488 amino acids |
Gene Ontology: |
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Cellular Component: |
nuclear envelope
[IDA]
nucleus [IDA] ubiquitin ligase complex [TAS] cytoplasm [IDA][ISS] spliceosomal complex [TAS] cytosol [IDA] |
Biological Process: |
RNA splicing, via transesterification reactions
[ISS]
nuclear mRNA splicing, via spliceosome [TAS] protein ubiquitination [TAS] ubiquitin-dependent protein catabolic process [ISS] |
Molecular Function: |
ubiquitin-protein ligase activity
[TAS]
protein binding [IPI] |
Sequence: |
|
Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MFCSISGETP KEPVISRVSG NVYEKRLIEQ VIRETSKDPV TQQECTLEDL VPVKVPDFVR 60 61 PRPPSATSLP ALLSLFQEEW DSVALEQFEL RRNLTETKQE LSTALYSLDA ALRVISRLTK 120 121 ERDEAREALA KFSDNIGTVS SKTIEVQEVE MGESDDQLKT SLRSTVEKTF QELSSKRKRT 180 181 KLQPKWATDD AVSQLLQATP STILENLETE STTSFFPSPE NSSFVLCLHK DELLCLDIQS 240 241 NSTLKIFEGS ALACCWLTSS KIAVATADAI SIFEFPVSSS GLQSVGEPTS SIPIDEKVNF 300 301 LQAHPSGEYL LAASNEKCYI FSLKSQVYNI TVAQHITSLA VHPDGNLFVA GLENGELRFF 360 361 ETSSGNELTK FGPHSSPVKT LQFGENGYWL VVTTNDDSDI FIWDLRKSEL VQKIPLQTKV 420 421 AAVSLDITSQ LLVSSDGETL YVHIYVKSSK SWRCMSQTHV SSISNLVWLN ELHQLLFSTS 480 481 NGAILRLG |
NOT SHOWING SINGLE HITS. [ Show Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..93] | 4.68 | Solution structure of the U-box in human ubiquitin conjugation factor E4A | |
2 | View Details | [94..488] | 55.30103 | PAF-AH Holoenzyme: Lis1/Alfa2 |
Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.97 |
Source: Reynolds et al. (2008)