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Protein Overview: Nf-YC-PA

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..234] PSI-BLAST 35.045757 Nuclear transcription factor Y subunit gamma (Nf-Yc2)
2 View Details [235..304] deduced N/A No confident structure predictions are available.
3 View Details [305..523] PSI-BLAST 7.045757 Sec24
4 View Details [524..601] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • binding
  • 3.27510691458843 bayes_pls_golite062009
  • DNA binding
  • 2.84801656088633 bayes_pls_golite062009
  • nucleic acid binding
  • 2.61296736453579 bayes_pls_golite062009
  • transcription regulator activity
  • 2.30478015157761 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
  • 1.18120033767195 bayes_pls_golite062009
  • protein binding
  • 1.07873333188144 bayes_pls_golite062009
  • transcription factor activity
  • 1.01889555697279 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.378390077792097 bayes_pls_golite062009
  • transcription factor binding
  • 0.20278000165075 bayes_pls_golite062009
  • transcription activator activity
  • 0.16305156761639 bayes_pls_golite062009
  • transcription cofactor activity
  • 0.0427278296123499 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle