YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Rpn2-PA, FBpp0306599

General Information:
Name(s) found: FBpp0306599 [FlyBase]
Rpn2-PA / FBpp0084754 [FlyBase]
Description(s) found:
Found 31 descriptions.
SHOW ALL
  • type=protein; loc=3R:join(24979453..24980395,24980458..24981765,24982024..24982835); ID=FBpp0306599; name=Rpn2-PC; parent=FBgn0028692,FBtr0334532; dbxref=FlyBase:FBpp0306599,FlyBase_Annotation_IDs:CG11888-PC,REFSEQ:NP_001263058,GB_protein:AGB96438; MD5=6b7894fc98cb2788a266883fac70e746; length=1020; release=r5.56; species=Dmel; [FlyBase]
  • The gene Rpn2 is referred to in FlyBase by the symbol Dmel\Rpn2 (CG11888, FBgn0028692). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:24979185..24982981. It has the cytological map location 98F13. There is experimental evidence that it has the molecular function</span>: endopeptidase activity; SUMO binding. There is experimental evidence that it is involved in the biological process</span>: cellular response to DNA damage stimulus; proteolysis. 5 alleles are reported. No phenotypic data is available. It has one annotated transcript and one annotated polypeptide. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 1020 amino acids

    Gene Ontology:
    Cellular Component: proteasome regulatory particle, base subcomplex [ISS][NAS]
    proteasome regulatory particle [IDA][ISS]
    Biological Process: proteolysis [IDA][ISS]
    regulation of protein catabolic process [IEA]
    response to DNA damage stimulus [IMP]
    Molecular Function: SUMO binding [IPI]
    endopeptidase activity [IDA]
    enzyme regulator activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLTSAAGII SLLDEPMPDL KVFALKKLDN IVDEFWPEIS ESIEKIEMLH EDRSFPENKL  60
   61 AGMVASKVFY HLGSFEDALT YALGAGDLFD VNARNEYTET IIAKCIDFYI AQRVEFIENP 120
  121 KEASVVDERL EGIVNRMIQR CLDDNQFRQA LGIALETRRM DTFKDAIMKS DDVRGMLAYA 180
  181 YNVTMSLIQN RGFRNEVLRC LVSLYRDLGV PDYVNMCQCL IFLEDPFAVA EMLDNLTRSS 240
  241 VETNNLMAYQ IAFDLYESAT QEFLGNVLQH LKNTAPIPTA LPSTFKPQGT TSEDGAKSEG 300
  301 DKSKSDEDIT EETPADDKVE RTIDSLNEVE KLHQKNIEKL ISILSGEVSI DLQLQFLIRS 360
  361 NHADLQVLRG TKEAVRVSIC HTATVIANAF MHSGTTSDQF LRDNLDWLAR ATNWAKLTAT 420
  421 ASLGVIHRGH EKDSLALMQS YLPKEAGPSS GYSEGGALYA LGLIHANHGA NIIDYLLQQL 480
  481 KDAQNENVRH GGCLGLGLAG MGTHRQDLYE QLKFNLYQDD AVTGEAAGIA MGMVMLGSKN 540
  541 AQAIEDMVSY AQETQHEKIL RGLAVGISLT MFSRLEEADP LVTSLSSDKD PVLRRSGMYT 600
  601 IAMAYNGTGS NKAIRKLLHV AVSDVNDDVR RAAVTAIGFI LFRSPEQCPS VVSLLAESYN 660
  661 PHVRYGAAMA LGIACAGTGL REAIALLEPM VKFDPVNFVR QGALIASAMI LIQHTDQSCP 720
  721 KSTFFRQLYA EVISNKHEDV MAKYGAILAQ GIIDAGGRNA TLSLQSRTGH TNLQAVVGML 780
  781 AFTQYWYWFP LAHTLSLAFT PTCVIGLNSD LKMPKMEYKS AAKPSLYAYP APLEEKKSEE 840
  841 REKVATAVLS IAARQKRREN ADKKEDEKMD VDEDSKEGAA VKKDEEAKAD EKMVTDEKPK 900
  901 KKDEKEKKKE EDKEKEAAGT SSEKDKDKEK DKKEKKEPEP TSEILQNPAR VLRQQLKVLS 960
  961 VIDGQSYEPL KDVTIGGIIV FQHTGKAEDQ ELVEPVAAFG PMNDEEKEPE PPEPFEYIED1020
 1021

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..171] MSA 1.086977 View MSA. No confident structure predictions are available.
    2 View Details [172..403] PSI-BLAST 5.0 No description for 2ot8A was found.
    3 View Details [404..799] PSI-BLAST 3.09691 AP1 clathrin adaptor core
    4 View Details [800..943] FFAS03 1.1 No description for 2j63A was found.
    5 View Details [944..1020] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.55

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle