| Protein: | Rpn2-PA, FBpp0306599 |
| Organism: | Drosophila melanogaster |
| Length: | 1020 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for Rpn2-PA, FBpp0306599.
| Description | E-value | Query Range |
Subject Range |
|
|
1041.0 | [0..1] | [1020..3] |
|
Region A: Residues: [1-171] |
1 11 21 31 41 51
| | | | | |
1 MSLTSAAGII SLLDEPMPDL KVFALKKLDN IVDEFWPEIS ESIEKIEMLH EDRSFPENKL 60
61 AGMVASKVFY HLGSFEDALT YALGAGDLFD VNARNEYTET IIAKCIDFYI AQRVEFIENP 120
121 KEASVVDERL EGIVNRMIQR CLDDNQFRQA LGIALETRRM DTFKDAIMKS D
|
| Detection Method: |  |
Shown below is our most confident prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [172-403] |
1 11 21 31 41 51
| | | | | |
1 DVRGMLAYAY NVTMSLIQNR GFRNEVLRCL VSLYRDLGVP DYVNMCQCLI FLEDPFAVAE 60
61 MLDNLTRSSV ETNNLMAYQI AFDLYESATQ EFLGNVLQHL KNTAPIPTAL PSTFKPQGTT 120
121 SEDGAKSEGD KSKSDEDITE ETPADDKVER TIDSLNEVEK LHQKNIEKLI SILSGEVSID 180
181 LQLQFLIRSN HADLQVLRGT KEAVRVSICH TATVIANAFM HSGTTSDQFL RD
|
| Detection Method: | |
| Confidence: | 5.0 |
| Match: | 2ot8A |
| Description: | No description for 2ot8A was found. |
|
Region A: Residues: [404-799] |
1 11 21 31 41 51
| | | | | |
1 NLDWLARATN WAKLTATASL GVIHRGHEKD SLALMQSYLP KEAGPSSGYS EGGALYALGL 60
61 IHANHGANII DYLLQQLKDA QNENVRHGGC LGLGLAGMGT HRQDLYEQLK FNLYQDDAVT 120
121 GEAAGIAMGM VMLGSKNAQA IEDMVSYAQE TQHEKILRGL AVGISLTMFS RLEEADPLVT 180
181 SLSSDKDPVL RRSGMYTIAM AYNGTGSNKA IRKLLHVAVS DVNDDVRRAA VTAIGFILFR 240
241 SPEQCPSVVS LLAESYNPHV RYGAAMALGI ACAGTGLREA IALLEPMVKF DPVNFVRQGA 300
301 LIASAMILIQ HTDQSCPKST FFRQLYAEVI SNKHEDVMAK YGAILAQGII DAGGRNATLS 360
361 LQSRTGHTNL QAVVGMLAFT QYWYWFPLAH TLSLAF
|
| Detection Method: | |
| Confidence: | 3.09691 |
| Match: | 1w63B |
| Description: | AP1 clathrin adaptor core |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [800-943] |
1 11 21 31 41 51
| | | | | |
1 TPTCVIGLNS DLKMPKMEYK SAAKPSLYAY PAPLEEKKSE EREKVATAVL SIAARQKRRE 60
61 NADKKEDEKM DVDEDSKEGA AVKKDEEAKA DEKMVTDEKP KKKDEKEKKK EEDKEKEAAG 120
121 TSSEKDKDKE KDKKEKKEPE PTSE
|
| Detection Method: | |
| Confidence: | 1.1 |
| Match: | 2j63A |
| Description: | No description for 2j63A was found. |
|
Region A: Residues: [944-1020] |
1 11 21 31 41 51
| | | | | |
1 ILQNPARVLR QQLKVLSVID GQSYEPLKDV TIGGIIVFQH TGKAEDQELV EPVAAFGPMN 60
61 DEEKEPEPPE PFEYIED
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
