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Protein Overview: FBpp0308303, FBp...

General Information:
Name(s) found: FBpp0308303 [FlyBase]
FBpp0308302 [FlyBase]
CG5890-PA / FBpp0084282 [FlyBase]
Description(s) found:
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  • gi|7301392|gb|AAF56519.1| CG5890 [Drosophila melanogaster] [NCBI NR]
  • gi|24650168|ref|NP_651436.1| CG5890 [Drosophila melanogaster] [NCBI NR]
  • gi|223556036|gb|ACM90876.1| IP07559p [Drosophila melanogaster] [NCBI NR]
  • type=protein; loc=3R:join(21693026..21693181,21693866..21693935,21694175..21694245,21694315..21694509,21695260..21695388); ID=FBpp0308303; name=CG5890-PD; parent=FBgn0039380,FBtr0339159; dbxref=FlyBase:FBpp0308303,FlyBase_Annotation_IDs:CG5890-PD; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r5.56; species=Dmel; [FlyBase]
  • type=protein; loc=3R:join(21693026..21693181,21693866..21693935,21694175..21694245,21694315..21694509,21695260..21695388); ID=FBpp0308302; name=CG5890-PC; parent=FBgn0039380,FBtr0339158; dbxref=FlyBase:FBpp0308302,FlyBase_Annotation_IDs:CG5890-PC; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r5.56; species=Dmel; [FlyBase]
  • This gene is referred to in FlyBase by the symbol Dmel\CG5890 (CG5890, FBgn0039380). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 3R:21692822..21695514. It has the cytological map location 96F5. Based on sequence similarity, it is predicted to have molecular function</span>: calcium ion binding. There is experimental evidence that it is involved in the biological process</span>: wing disc dorsal/ventral pattern formation. 3 alleles are reported. No phenotypic data is available. It has 2 annotated transcripts and 2 annotated polypeptides. [FlyBase]
  • >CG5890-PA translation from_gene[CG5890 CG5890 FBgn0039380] seq_release:3 mol_weight=23973 cds_boundaries:(3R:21,682,391..21,684,750[+]) aa_length:206 transcript_info:[CG5890-RA seq_release:3] gene_info:[gene symbol:CG5890 FBgn0039380 gene_boundaries:( [hmr_yeast5_DM3-1_pombe.fasta]
  • (Q9VBL2) CG5890 protein [DrosMelano7227.FASTAC.txt]
  • (AE003753) CG5890 gene product [Drosophila melanogaster] [yeastflysequest.fasta]
  • CG5890-PA [Drosophila melanogaster]gi|24650168|ref|NP_651436.1| CG5890-PA [Drosophila melanogaster] [nrdb_11152004_Chlamydomonas]
  • type=protein; loc=3R:join(21693026..21693181,21693866..21693935,21694175..21694245,21694315..21694509,21695260..21695388); ID=FBpp0084282; name=CG5890-PA; parent=FBgn0039380,FBtr0084908; dbxref=FlyBase:FBpp0084282,FlyBase_Annotation_IDs:CG5890-PA,GB_prote [fly-100309-contam.fasta]
  • CG5890-PA [Drosophila melanogaster] [nr-271106-contam.fasta]
  • type=protein; loc=3R:join(21693026..21693181,21693866..21693935,21694175..21694245,21694315..21694509,21695260..21695388); ID=FBpp0084282; name=CG5890-PA; parent=FBgn0039380,FBtr0084908; dbxref=FlyBase:FBpp0084282,FlyBase_Annotation_IDs:CG5890-PA,GB_protein:AAF56519.1,REFSEQ:NP_651436,GB_protein:AAF56519; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r5.16; species=Dmel; [fly-contam-His-TEV-Tub4complex.fasta]
  • type=protein; loc=3R:join(21693026..21693181,21693866..21693935,21694175..21694245,21694315..21694509,21695260..21695388); ID=FBpp0084282; name=CG5890-PA; parent=FBgn0039380,FBtr0084908; dbxref=FlyBase:FBpp0084282,FlyBase_Annotation_IDs:CG5890-PA,GB_protein:AAF56519.1,REFSEQ:NP_651436,GB_protein:AAF56519; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r5.21; species=Dmel; [Other_drosophila_na_09-09-2009_reversed.fasta]
  • CG5890, isoform A OS=Drosophila melanogaster GN=CG5890-RA PE=1 SV=1 [UniProt_drosophila_07-01-2011_reversed.fasta]
  • type=protein; loc=3R:join(21693026..21693181,21693866..21693935,21694175..21694245,21694315..21694509,21695260..21695388); ID=FBpp0084282; name=CG5890-PA; parent=FBgn0039380,FBtr0084908; dbxref=FlyBase:FBpp0084282,FlyBase_Annotation_IDs:CG5890-PA,GB_protein:AAF56519.1,REFSEQ:NP_651436,GB_protein:AAF56519,FlyMine:FBpp0084282,modMine:FBpp0084282; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r5.46; species=Dmel; [fly-062812-sfps-sandra-contam.fasta]
  • CG5890, isoform A OS=Drosophila melanogaster GN=CG5890-RA PE=2 SV=1 [UniProt_D_Melanogaster_07132012_07-13-2012_reversed.fasta]
  • type=protein; loc=3R:join(25867304..25867459,25868144..25868213,25868453..25868523,25868593..25868787,25869538..25869666); ID=FBpp0084282; name=CG5890-PA; parent=FBgn0039380,FBtr0084908; dbxref=FlyBase:FBpp0084282,FlyBase_Annotation_IDs:CG5890-PA,GB_protein:AAF56519.1,REFSEQ:NP_651436,GB_protein:AAF56519,FlyMine:FBpp0084282,modMine:FBpp0084282; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(25867304..25867459,25868144..25868213,25868453..25868523,25868593..25868787,25869538..25869666); ID=FBpp0308302; name=CG5890-PC; parent=FBgn0039380,FBtr0339158; dbxref=GB_protein:ACZ95033,REFSEQ:NP_001163739,FlyBase:FBpp0308302,FlyBase_Annotation_IDs:CG5890-PC; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(25867304..25867459,25868144..25868213,25868453..25868523,25868593..25868787,25869538..25869666); ID=FBpp0308303; name=CG5890-PD; parent=FBgn0039380,FBtr0339159; dbxref=GB_protein:AHN57533,REFSEQ:NP_001287534,FlyBase:FBpp0308303,FlyBase_Annotation_IDs:CG5890-PD; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r6.02; species=Dmel; [fly-2014-05-contam.fasta]
  • type=protein; loc=3R:join(25867304..25867459,25868144..25868213,25868453..25868523,25868593..25868787,25869538..25869666); ID=FBpp0084282; name=CG5890-PA; parent=FBgn0039380,FBtr0084908; dbxref=FlyBase:FBpp0084282,FlyBase_Annotation_IDs:CG5890-PA,GB_protein:AAF56519.1,REFSEQ:NP_651436,GB_protein:AAF56519,FlyMine:FBpp0084282,modMine:FBpp0084282; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3R:join(25867304..25867459,25868144..25868213,25868453..25868523,25868593..25868787,25869538..25869666); ID=FBpp0308302; name=CG5890-PC; parent=FBgn0039380,FBtr0339158; dbxref=GB_protein:ACZ95033,REFSEQ:NP_001163739,FlyBase:FBpp0308302,FlyBase_Annotation_IDs:CG5890-PC; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • type=protein; loc=3R:join(25867304..25867459,25868144..25868213,25868453..25868523,25868593..25868787,25869538..25869666); ID=FBpp0308303; name=CG5890-PD; parent=FBgn0039380,FBtr0339159; dbxref=GB_protein:AHN57533,REFSEQ:NP_001287534,FlyBase:FBpp0308303,FlyBase_Annotation_IDs:CG5890-PD; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r6.07; species=Dmel; [fly-08202015-contam.fasta]
  • FBpp0084282 type=protein; loc=3R:join(25867304..25867459,25868144..25868213,25868453..25868523,25868593..25868787,25869538..25869666); ID=FBpp0084282; name=CG5890-PA; parent=FBgn0039380,FBtr0084908; dbxref=FlyBase:FBpp0084282,FlyBase_Annotation_IDs:CG5890-PA,GB_protein:AAF56519.1,REFSEQ:NP_651436,GB_protein:AAF56519,FlyMine:FBpp0084282,modMine:FBpp0084282; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0308302 type=protein; loc=3R:join(25867304..25867459,25868144..25868213,25868453..25868523,25868593..25868787,25869538..25869666); ID=FBpp0308302; name=CG5890-PC; parent=FBgn0039380,FBtr0339158; dbxref=GB_protein:ACZ95033,REFSEQ:NP_001163739,FlyBase:FBpp0308302,FlyBase_Annotation_IDs:CG5890-PC; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • FBpp0308303 type=protein; loc=3R:join(25867304..25867459,25868144..25868213,25868453..25868523,25868593..25868787,25869538..25869666); ID=FBpp0308303; name=CG5890-PD; parent=FBgn0039380,FBtr0339159; dbxref=GB_protein:AHN57533,REFSEQ:NP_001287534,FlyBase:FBpp0308303,FlyBase_Annotation_IDs:CG5890-PD; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r6.09; species=Dmel; [dmel-all-translation-r6.09.fasta]
  • [fly-122215-dmel-6-09-contam.fasta]
  • type=protein; loc=3R:join(25867304..25867459,25868144..25868213,25868453..25868523,25868593..25868787,25869538..25869666); ID=FBpp0084282; name=CG5890-PA; parent=FBgn0039380,FBtr0084908; dbxref=FlyBase:FBpp0084282,FlyBase_Annotation_IDs:CG5890-PA,GB_protein:AAF56519.1,REFSEQ:NP_651436,GB_protein:AAF56519,UniProt/TrEMBL:Q9VBL2,FlyMine:FBpp0084282,modMine:FBpp0084282; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3R:join(25867304..25867459,25868144..25868213,25868453..25868523,25868593..25868787,25869538..25869666); ID=FBpp0308302; name=CG5890-PC; parent=FBgn0039380,FBtr0339158; dbxref=GB_protein:ACZ95033,REFSEQ:NP_001163739,FlyBase:FBpp0308302,FlyBase_Annotation_IDs:CG5890-PC,UniProt/TrEMBL:Q9VBL2; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
  • type=protein; loc=3R:join(25867304..25867459,25868144..25868213,25868453..25868523,25868593..25868787,25869538..25869666); ID=FBpp0308303; name=CG5890-PD; parent=FBgn0039380,FBtr0339159; dbxref=GB_protein:AHN57533,REFSEQ:NP_001287534,FlyBase:FBpp0308303,FlyBase_Annotation_IDs:CG5890-PD,UniProt/TrEMBL:Q9VBL2; MD5=3202666660659312ff253c33dc477cb1; length=206; release=r6.14; species=Dmel; [fly-dmel-jan2017-sandracontam.fasta]
    • Organism: Drosophila melanogaster
    Length: 206 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: wing disc dorsal/ventral pattern formation [IGI]
    Molecular Function: calcium ion binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASPPESPIE EVVYELEHTR VPKPIPVALE DLCRQTKFTK QEIRVMYRGF KTECPEGVVH  60
   61 EDCFKDIYAK FFPHGNSSLY AHYVFKAFDV NCNGAISFRD LLVTLSTLLR GSVYERLRWT 120
  121 FKLYDLNGDG RISRGELSEI ILAIHELMGR RPHQPEDDRK ARDQVDRVFR KLDLNQDGII 180
  181 TIEEFLEACL KDDLVTRSLQ MFDNDL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..206] PSI-BLAST 31.39794 Crystal structure of the complex between KChIP1 and Kv4.2 N1-30

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein serine/threonine phosphatase activity
    		•  3.97554780295345 bayes_pls_golite062009
  • calcium-dependent protein serine/threonine phosphatase activity
    		•  3.810413029613 bayes_pls_golite062009
  • phosphoprotein phosphatase activity
    		•  3.48568327579218 bayes_pls_golite062009
  • binding
    		•  3.17556402087346 bayes_pls_golite062009
  • phosphatase activity
    		•  2.70444493387876 bayes_pls_golite062009
  • phosphoric ester hydrolase activity
    		•  2.62265049589513 bayes_pls_golite062009
  • metal ion binding
    		•  2.62077305565026 bayes_pls_golite062009
  • cation binding
    		•  2.62077305565026 bayes_pls_golite062009
  • ion binding
    		•  2.61312132078717 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.57032504567157 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.55650624542181 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.37465721152046 bayes_pls_golite062009
  • clathrin binding
    		•  2.36616108128297 bayes_pls_golite062009
  • protein binding
    		•  2.21291432166051 bayes_pls_golite062009
  • calcium-dependent protein serine/threonine phosphatase regulator activity
    		•  2.11312280020523 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.99763594451773 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.58932524618576 bayes_pls_golite062009
  • calcium ion binding
    		•  1.40919295397643 bayes_pls_golite062009
  • structural constituent of muscle
    		•  1.30577051923353 bayes_pls_golite062009
  • calcium-dependent protein kinase inhibitor activity
    		•  1.29632226581856 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.29595371278065 bayes_pls_golite062009
  • transporter activity
    		•  1.15928534291452 bayes_pls_golite062009
  • signal transducer activity
    		•  1.11607939838219 bayes_pls_golite062009
  • molecular transducer activity
    		•  1.11607939838219 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.02715871704923 bayes_pls_golite062009
  • DNA binding
    		•  0.98588735736701 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.945691505472547 bayes_pls_golite062009
  • guanylate cyclase regulator activity
    		•  0.84389905735679 bayes_pls_golite062009
  • cyclase regulator activity
    		•  0.84389905735679 bayes_pls_golite062009
  • cation channel activity
    		•  0.802117767859521 bayes_pls_golite062009
  • phosphatase regulator activity
    		•  0.79868922563047 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.787740261079819 bayes_pls_golite062009
  • kinase activity
    		•  0.782396352346639 bayes_pls_golite062009
  • protein phosphatase regulator activity
    		•  0.74941896415675 bayes_pls_golite062009
  • calcium channel regulator activity
    		•  0.7164851905066 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.693724160233023 bayes_pls_golite062009
  • transcription repressor activity
    		•  0.666488715029225 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.654002071540024 bayes_pls_golite062009
  • calcium sensitive guanylate cyclase activator activity
    		•  0.630360514213104 bayes_pls_golite062009
  • channel activity
    		•  0.386960491413065 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.386960491413065 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.362205423422174 bayes_pls_golite062009
    		• 0.34446792626966 bayes_pls_golite062009
  • ion channel activity
    		•  0.343477643719352 bayes_pls_golite062009
  • channel regulator activity
    		•  0.32809521759917 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  0.308919475701377 bayes_pls_golite062009
  • transferase activity
    		•  0.304928629994907 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  0.304496519713588 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  0.278054748078249 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.27738240687034 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.246383459363256 bayes_pls_golite062009
  • potassium channel activity
    		•  0.200283164564768 bayes_pls_golite062009
  • gated channel activity
    		•  0.150185445887481 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  0.109511951498555 bayes_pls_golite062009
  • motor activity
    		•  0.0886596083402598 bayes_pls_golite062009
  • protein complex binding
    		•  0.0676093357928913 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle