Protein Overview: gi|23171428, gi|...

General Information:
Name(s) found:	gi\|24647318 [NCBI NR] gi\|23171428 [NCBI NR]
Description(s) found: Found 9 descriptions. SHOW ALL	gi\|24647318\|ref\|NP_732097.1\| helicase 89B [Drosophila melanogaster] [NCBI NR] gi\|23171428\|gb\|AAF55260.2\| helicase 89B [Drosophila melanogaster] [NCBI NR]
Organism:	Drosophila melanogaster
Length:	1929 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	Toll signaling pathway [IMP] innate immune response [IMP] antimicrobial humoral response [IMP] positive regulation of antibacterial peptide biosynthetic process [IMP]
Molecular Function:	ATP binding [IEA] DNA binding [IEA] helicase activity [NAS] ATP-dependent DNA helicase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLIVFNIPCR LDRLFILLET GSTAATRQAA AKQIGEVQKL YPHELHALLN RLVGYLHSTS  60
   61 WETRIAAAQT VEAILKQVPP WQPEFQVLPK KERCATNTAT AAAAAEEDSC QSSGSNSTTA 120
  121 SERLLSFDEF DLQQILHKGA RLIGSEGNEF DVQEEQPASG GGEEDRSLAS RLSRQRAVLN 180
  181 DKLGLTTAAK LGVNLTDMIT DEDVALNRSG STYNVNAEKL PVEHLLNIKT AANGSGQAPL 240
  241 SCREMNRAKR KARQNTSGCS VTAVTPTCSR RNSNSNHSTG SNHSSNGTTG AAIEEPEKKK 300
  301 LKSTDRQEIF YSLNAAVPDA TGTWVDAVSW PLENFCSRLF IDLFHAKWEV RHGAATALRE 360
  361 LINQHAQGAG KAVLQTREQM DEAHSRWLED AALRLLCVLC LDRFGDFVSD QVVAPVRETC 420
  421 AQVLGTLVKE MEASKVQRIV NILLQLIQHK NEWDVRHGGL LGLKYVFVVR EELLPIYLPQ 480
  481 SISNILIGLL DAVDDVGAVA AATLIPVSSW LPKLLNPAQV SSIVKMLWDL LLDQDELTSA 540
  541 CNSFMGLLAA ILCLPNAARW VEMEPMAILV PRLWPFLSHS TSSVRRSTLK TLMTLTSADR 600
  601 VKSEPKDENQ VKEEADKEEM KLNFGVSDWK WELLQQALRH IYQRILVEPQ ADIQALARQV 660
  661 WSNLIQHADL GALLHAACPF VSSWICLSMQ PPRLAFDAGV LIRAGGDVST PGSTSRKRTP 720
  721 RIGDELGGNI LAQSNASLKL YLGGSEATPL DVRDANFMRA RISSSRALGA LSHYLVQPAP 780
  781 GVVYTPQTES PTDCYTKVLL GHLNAHSAVQ RIVCGLIIAF WALEDEPVRP GPPNLQEKLH 840
  841 QCVSEYVYYD EVAISLTRLL QEAQDFIATL KQNKIPINDF NNAKILTLDQ IEAVATTLSE 900
  901 NLRSYPLKPK VLDMLEERRR SLQASYQQTT SEQSAYHVSA QAALAGAICA LHCLPDKLNP 960
  961 VVKPLMESIK REQCLQLQQL SAEFLVHLMD QVCDRNPSPN SKILNNLCTL LRSDPEFTPK1020
 1021 LVMPLETLKQ TPVSSEVINN CVYYGILTLA LQQTVTTTNT RSGAGGATTP TATTAPRGPG1080
 1081 RPPTGEILSA TNATAHIELK AQQAKEAEAK QCRIQRLGAA CAIEKLCRIF GEQIIEKVAV1140
 1141 FQHLMFGKVE QFVKEAYDWR LGSLLPDLGV CNELVSSMQL IETAAPHLHV ALHPQMFALL1200
 1201 PSLGFIVCHP LKAVRHMAAR CIAVLAEIDA CQTMQFVVHD LLPLLGKIEQ LIERQGAIEA1260
 1261 IERVVSRLQI KVVPYIVLLV VPLLGAMSDP DESVRLLSTH CFANLVQLMP LDGKTEQLKS1320
 1321 DPLQARKTRD REFLDYLFNP KSIPNYKVPV PISVELRCYQ QAGINWLWFL NKYNLHGILC1380
 1381 DDMGLGKTLQ TICILAGDHM HRQTANLANL PSLVICPPTL TGHWVYEVEK FLDQGSVLRP1440
 1441 LHYYGFPVGR EKLRSDIGTK CNLVVASYDT VRKDIDFFSG IHFNYCVLDE GHIIKNGKTK1500
 1501 SSKAIKRLKA NHRLILSGTP IQNNVLELWS LFDFLMPGFL GTEKQFVQRF SRPILSSRDA1560
 1561 KSSAKEQEAG VLAMEALHRQ VLPFLLRRVK EDVLKDLPPK ITQDLLCELS PLQLRLYEDF1620
 1621 SNKHLKDCLD KLGDSSSASM VTENLSAKTH IFQALRYLQN VCNHPKLVLR QSEELTKVTS1680
 1681 QLALSNSSLD DIEHSAKLPA LKQLLLDCGI GVQTESVSQH RALIFCQLKA MLDIVEQDLL1740
 1741 RRHLPSVTYL RLDGSVPASQ RQDIVNNFNS DPSIDVLLLT TMVGGLGLNL TGADTVIFVE1800
 1801 HDWNPMKDLQ AMDRAHRIGQ KKVVNVYRLI TRNSLEEKIM GLQKFKILTA NTVVSAENAS1860
 1861 LQTMGTSQIF DLFNGGKDKG AESGSSAVQG TASGGMSMNT IIENLPELWS EHQYEEEYDL1920
 1921 GNFVQALKK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

No functions predicted.

Term	Confidence	Notes
protein binding	1.94328873922819	bayes_pls_golite062009
binding	1.62122417417421	bayes_pls_golite062009
protein transporter activity	0.943130585917006	bayes_pls_golite062009
nucleic acid binding	0.675283789558554	bayes_pls_golite062009
transporter activity	0.420208786573211	bayes_pls_golite062009
transcription regulator activity	0.222868189542678	bayes_pls_golite062009
catalytic activity	0.0890324459390017	bayes_pls_golite062009

Term	Confidence	Notes
nucleoside-triphosphatase activity	1.69240737024755	bayes_pls_golite062009
pyrophosphatase activity	1.65296291878002	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	1.64318297340116	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	1.64169398852165	bayes_pls_golite062009
catalytic activity	1.37148167194523	bayes_pls_golite062009
binding	1.30574971150356	bayes_pls_golite062009
ATPase activity	1.20060977637766	bayes_pls_golite062009
transporter activity	1.14815595550467	bayes_pls_golite062009
ATPase activity, coupled	1.08141765801535	bayes_pls_golite062009
transmembrane transporter activity	1.01232806016411	bayes_pls_golite062009
active transmembrane transporter activity	0.92246823619313	bayes_pls_golite062009
P-P-bond-hydrolysis-driven transmembrane transporter activity	0.89546790004613	bayes_pls_golite062009
primary active transmembrane transporter activity	0.89065853471483	bayes_pls_golite062009
hydrolase activity	0.875592967682638	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances	0.8668136831732	bayes_pls_golite062009
ATPase activity, coupled to movement of substances	0.86536264587818	bayes_pls_golite062009
ATPase activity, coupled to transmembrane movement of substances	0.86511385357843	bayes_pls_golite062009
protein binding	0.502813311049029	bayes_pls_golite062009
nucleic acid binding	0.495953203188599	bayes_pls_golite062009
purine ribonucleotide binding	0.3056113353665	bayes_pls_golite062009
ribonucleotide binding	0.30512981340046	bayes_pls_golite062009
purine nucleotide binding	0.30259037403175	bayes_pls_golite062009
nucleotide binding	0.28998663538132	bayes_pls_golite062009
DNA binding	0.128213991729785	bayes_pls_golite062009
transcription regulator activity	0.125640198783258	bayes_pls_golite062009
helicase activity	0.00674361801283974	bayes_pls_golite062009

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.45

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..114]	deduced	N/A	No confident structure predictions are available.
2	View Details	[115..286]	deduced	N/A	No confident structure predictions are available.
3	View Details	[287..370]	deduced	N/A	No confident structure predictions are available.
4	View Details	[371..1317]	FFAS03	2.48	No description for 2ie3A was found.
5	View Details	[1318..1929]	PSI-BLAST	97.522879	Structure of the SWI2/SNF2 chromatin remodeling domain of eukaryotic Rad54

Protein Overview: gi|23171428, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: