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Protein Overview: gi|21645643, gi|...

General Information:
Name(s) found: gi|24658511 [NCBI NR]
gi|21645643 [NCBI NR]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • gi|24658511|ref|NP_611715.2| CG3536-PA [Drosophila melanogaster] [NCBI NR]
  • gi|21645643|gb|AAF46899.2| CG3536-PA [Drosophila melanogaster] [NCBI NR]
    • Organism: Drosophila melanogaster
    Length: 1218 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMAISAATPS LRRATAIDGD ADADADADAG ADGNDNENHV DGYSDDDDDD ERWLRAARAQ  60
   61 KVQKAQTQAY AAHNDRPQTK TTVAIRQNNG SNKSNSNSNS KCNSSSSNNN NNYKSATTSQ 120
  121 SNINHRLAPR ASFPEIMQPR LSLNGLLNPS LMPSPRPLYR DHSSRSINPL TAYEQQMAEL 180
  181 DGSFYASNAG YLGAGMGGSA GDGTTCTNLT VGGGSTGGGA MASGGGGTSA QVGGGGGGSG 240
  241 GGGAAIHTTE LSITPTMAGD EQFIDLGSLR RFSIDRQSFL DLGPKFGMTQ PKFGQSVSQQ 300
  301 GFFTSHDSLA TPCASRASNS HMATVSTASE MDLLHNKQRN KSRGRLKTAA SGDQPLLGTW 360
  361 NRSTGRGSQD NTLAGGGATS LAMGGHNQYG GNYCNGTDRY PRSRSQQQGH HNAAQQAHHP 420
  421 YQLQHSASTV SHHPHAHGPP SQGGPGGPGP PHGGHPHHPH HGGAGSGGGS GPGSHGGQPH 480
  481 HQKPRRTASQ RIRAATAARK LHFVFDPAGR LCYYWSMVVS MAFLYNFWVI IYRFAFQEIN 540
  541 RRTIAIWFCL DYLSDFLYLI DILFHFRTGY LEDGVLQTDA LKLRTHYMNS TIFYIDCLCL 600
  601 LPLDFLYLSI GFNSILRSFR LVKIYRFWAF MDRTERHTNY PNLFRSTALI HYLLVIFHWN 660
  661 GCLYHIIHKN NGFGSRNWVY HDSESADVVK QYLQSYYWCT LALTTIGDLP KPRSKGEYVF 720
  721 VILQLLFGLM LFATVLGHVA NIVTSVSAAR KEFQAKLDGV KTYMRMRRVP NHLQVKVIKW 780
  781 FDYLWLTQKC SDEERAVSCL PDKLKAEIAI NVHLDTLKRV EIFQNTEAGF LCELVLRLRP 840
  841 VLFSPGDYIC RKGEVGKEMY IVNRGRLQVV ADNGKTVMAS LKAGSYFGEI SILNMGTAGN 900
  901 RRTASVRSVG YSDLFVLSKK DMWDVLKEYP AARVRLESIA VKRLEKYKKA PLEKVKYFNV 960
  961 VAMGRCQSTP GLVESCGRTS LEEMWLPPAT AGASSLMHHH QALQQQHQAS QQQPHRQEST1020
 1021 QTSSQTHGYS PRSYADRLAR ATDSPRSVSP SAHGSEERPR SRTTSHHSIR PQSQPSHTGH1080
 1081 ICDSSSQLEC YGAGVGGAGG GTTPLLGSHE VLEDEIKRLR ERLHTVESEN QALNTKLSQQ1140
 1141 QWDLENRLAE IEMQICGVSS TSSVDPENET EELERNRERA AAAIQQQEDR KDRERKAQRG1200
 1201 RPIESATGSQ SCAKYFSL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..213] MSA 1.003949 View MSA. No confident structure predictions are available.
    2 View Details [214..281] deduced N/A No confident structure predictions are available.
    3 View Details [282..464] MSA 1.364992 View MSA. No confident structure predictions are available.
    4 View Details [465..755] PSI-BLAST 9.0 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    5 View Details [756..967] PSI-BLAST 21.522879 HCN2J 443-645 in the presence of cGMP
    6 View Details [968..1033] deduced N/A No confident structure predictions are available.
    7 View Details [1034..1218] FFAS03 1.06 Fibrinogen

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5
    Term Confidence Notes
  • cyclic nucleotide-gated ion channel activity
    		•  10.1422916734545 bayes_pls_golite062009
  • intracellular cyclic nucleotide activated cation channel activity
    		•  10.1422916734545 bayes_pls_golite062009
  • intracellular ligand-gated ion channel activity
    		•  9.72053268940283 bayes_pls_golite062009
  • intracellular cGMP activated cation channel activity
    		•  9.19973076787954 bayes_pls_golite062009
  • ion channel activity
    		•  8.54258173089828 bayes_pls_golite062009
  • gated channel activity
    		•  8.40583491856766 bayes_pls_golite062009
  • channel activity
    		•  8.39905773163311 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  8.39905773163311 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  8.39470084162975 bayes_pls_golite062009
  • cation channel activity
    		•  8.37340171056317 bayes_pls_golite062009
  • cGMP binding
    		•  7.7575871125398 bayes_pls_golite062009
  • ligand-gated channel activity
    		•  7.41584542512987 bayes_pls_golite062009
  • ligand-gated ion channel activity
    		•  7.41584542512987 bayes_pls_golite062009
  • cyclic nucleotide binding
    		•  7.37322432929433 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  7.27305202954784 bayes_pls_golite062009
  • GMP binding
    		•  5.49455172024846 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  4.92543918512794 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  4.90247452112447 bayes_pls_golite062009
  • intracellular cAMP activated cation channel activity
    		•  3.95109938608832 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  3.17407714154852 bayes_pls_golite062009
  • potassium channel activity
    		•  3.16645830461177 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.68223244325599 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.45301353888223 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  2.42821009576643 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.29036912617062 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  2.1888705807099 bayes_pls_golite062009
  • binding
    		•  1.39247933044015 bayes_pls_golite062009
  • protein binding
    		•  0.71319432010926 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.685020633246238 bayes_pls_golite062009
  • signal transducer activity
    		•  0.685020633246238 bayes_pls_golite062009
  • enzyme regulator activity
    		•  0.362412435891451 bayes_pls_golite062009
  • transporter activity
    		•  0.0214385136840991 bayes_pls_golite062009
    6 No functions predicted.
    7 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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