YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: Dscam-PI

General Information:
Name(s) found: Dscam-PI / FBpp0110378 [FlyBase]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • The gene Down syndrome cell adhesion molecule is referred to in FlyBase by the symbol Dmel\Dscam (CG17800, FBgn0033159). It is a protein_coding_gene from Drosophila melanogaster. Its sequence location is 2R:3207059..3269374. It has the cytological map location 43A4-43B1. There is experimental evidence that it has the molecular function</span>: protein binding; bacterial binding; protein homodimerization activity; axon guidance receptor activity. There is experimental evidence that it is involved in the biological process</span>: dendrite self-avoidance; axon extension involved in axon guidance; axon guidance; phagocytosis; central nervous system morphogenesis; neuron development; axonal fasciculation; mushroom body development; peripheral nervous system development. 120 alleles are reported. The phenotypes of these alleles are annotated with 18 unique terms, many of which group under: nervous system; multi-cell-component structure; organ system; adult segment; embryonic nervous system; commissure; antennal segment; adult brain; peripheral nervous system; mushroom body. It has 59 annotated transcripts and 59 annotated polypeptides. [FlyBase]
    • Organism: Drosophila melanogaster
    Length: 2017 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [ISS]
    dendrite [IDA]
    neuronal cell body [IDA]
    axon [IDA]
    Biological Process: mushroom body development [IMP]
    dendrite self-avoidance [IDA][IMP]
    phagocytosis [IMP]
    axon guidance [IGI][IMP][TAS]
    peripheral nervous system development [IMP]
    neuron development [IMP]
    central nervous system morphogenesis [IMP]
    axonal fasciculation [IMP]
    axon extension involved in axon guidance [IMP]
    Molecular Function: protein binding [IDA]
    protein homodimerization activity [IPI]
    axon guidance receptor activity [IMP][NAS]
    bacterial cell surface binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMPNERLKW LMLFAAVALI ACGSQTLAAN PPDADQKGPV FLKEPTNRID FSNSTGAEIE  60
   61 CKASGNPMPE IIWIRSDGTA VGDVPGLRQI SSDGKLVFPP FRAEDYRQEV HAQVYACLAR 120
  121 NQFGSIISRD VHVRAVVAQY YEADVNKEHV IRGNSAVIKC LIPSFVADFV EVVSWHTDEE 180
  181 ENYFPGAEYD GKYLVLPSGE LHIREVGPED GYKSYQCRTK HRLTGETRLS ATKGRLVITE 240
  241 PVGGKAPTLL SNDIKRSWIE RMLSTNLALF CPAQGFPVPA FRWYKFIEGT TRKQAVVLND 300
  301 RVKQVSGTLI IKDAVVEDSG KYLCVVNNSV GGESVETVLT VTAPLSAKID PPTQTVDFGR 360
  361 PAVFTCQYTG NPIKTVSWMK DGKAIGHSEP VLRIESVKKE DKGMYQCFVR NDQESAEASA 420
  421 ELKLGGRFDP PVIRQAFQEE TMEPGPSVFL KCVAGGNPTP EISWELDGKK IANNDRYQVG 480
  481 QYVTVNGDVV SYLNITSVHA NDGGLYKCIA KSKVGVAEHS AKLNVYGLPY IRQMEKKAIV 540
  541 AGETLIVTCP VAGYPIDSIV WERDNRALPI NRKQKVFPNG TLIIENVERN SDQATYTCVA 600
  601 KNQEGYSARG SLEVQVMVPP KITPFDFGDE PTNFEDSVSV TCLISSGDLP IDIEWFFNEY 660
  661 GISSYSGISV VKGGKRNSVL SIDSVQARHA GNYSCRAKNH AAAVNYTTSL IVNVPPRWIL 720
  721 EPTDKAFAQG SDAKVECKAD GFPKPQVTWK KAVGDTPGEY KDLKKSDNIR VEEGTLHVDN 780
  781 IQKTNEGYYL CEAINGIGSG LSAVIMISVQ APPEFTEKLR NQTARRGEPA VLQCEAKGEK 840
  841 PIGILWNMNN MRLDPKNDNR YTIREEILST GVMSSLSIKR TERSDSALFT CVATNAFGSD 900
  901 DASINMIVQE VPEMPYALKV LDKSGRSVQL SWAQPYDGNS PLDRYIIEFK RSRASWSEID 960
  961 RVIVPGHTTE AQVQKLSPAT TYNIRIVAEN AIGTSQSSEA VTIITAEEAP SGKPQNIKVE1020
 1021 PVNQTTMRVT WKPPPRTEWN GEILGYYVGY KLSNTNSSYV FETINFITEE GKEHNLELQN1080
 1081 LRVYTQYSVV IQAFNKIGAG PLSEEEKQFT AEGTPSQPPS DTACTTLTSQ TIRVGWVSPP1140
 1141 LESANGVIKT YKVVYAPSDE WYDETKRHYK KTASSDTVLH GLKKYTNYTM QVLATTAGGD1200
 1201 GVRSVPIHCQ TEPDVPEAPT DVKALVMGNA AILVSWRPPA QPNGIITQYT VYSKAEGAET1260
 1261 ETKTQKVPHY QMSFEATELE KNKPYEFWVT ASTTIGEGQQ SKSIVAMPSD QVPAKIASFD1320
 1321 DTFTATFKED AKMPCLAVGA PQPEITWKIK GVEFSANDRM RVLPDGSLLI KSVNRQDAGD1380
 1381 YSCHAENSIA KDSITHKLIV LAPPQSPHVT LSATTTDALT VKLKPHEGDT APLHGYTLHY1440
 1441 KPEFGEWETS EVSVDSQKHN IEGLLCGSRY QVYATGFNNI GAGEASDILN TRTKGQKPKL1500
 1501 PEKPRFIEVS SNSVSLHFKA WKDGGCPMSH FVVESKKRDQ IEWNQISNNV KPDNNYVVLD1560
 1561 LEPATWYNLR ITAHNSAGFT VAEYDFATLT VTGGTIAPSR DLPELSAEDT IRIILSNLNL1620
 1621 VVPVVAALLV IIIAIIVICI LRSKGNHHKD DVVYNQTMGP GATLDKRRPD LRDELGYIAP1680
 1681 PNRKLPPVPG SNYNTCDRIK RGRGGLRSNH STWDPRRNPN LYEELKAPPV PMHGNHYGHA1740
 1741 HGNAECHYRH PGMEDEICPY ATFHLLGFRE EMDPTKAMNF QTFPHQNGHA GPVPGHAGTM1800
 1801 LPPGHPGHVH SRSGSQSMPR ANRYQRKNSQ GGQSSIYTPA PEYDDPANCA EEDQYRRYTR1860
 1861 VNSQGGSLYS GPGPEYDDPA NCAPEEDQYG SQYGGPYGQP YDHYGSRGSM GRRSIGSARN1920
 1921 PGNGSPEPPP PPPRNHDMSN SSFNDSKESN EISEAECDRD HGPRGNYGAV KRSPQPKDQR1980
 1981 TTEEMRKLIE RNETGPKQLQ LQQANGAGFT AYDTMAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] PSI-BLAST 83.0 No description for 2v5sA was found.
    2 View Details [154..243] PSI-BLAST 7.39794 Immunoglobulin heavy chain variable domain, VH; Immunoglobulin heavy chain gamma constant domain 1, CH1-gamma; Immunoglobulin heavy chain gamma constant domain 2, CH2-gamma; Immunoglobulin heavy chain gamma constant domain 3, CH3-gamma
    3 View Details [244..896] PSI-BLAST 58.045757 Model of human carcinoembryonic antigen by homology modelling and curve-fitting to experimental solution scattering data
    4 View Details [897..1009] PSI-BLAST 37.522879 No description for 2nziA was found.
    5 View Details [1010..1112] PSI-BLAST 10.69897 Solution structure of the second FNIII domain of DSCAML1 protein
    6 View Details [1113..1158] PSI-BLAST 12.09691 The solution structure of the third fibronectin type III domain of human Neogenin
    7 View Details [1159..1605] PSI-BLAST 21.0 No description for 2ec8A was found.
    8 View Details [1606..1806] deduced N/A No confident structure predictions are available.
    9 View Details [1807..2017] MSA 3.113996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • telethonin binding
    		•  6.64811984458494 bayes_pls_golite062009
  • alpha-actinin binding
    		•  5.77350124471385 bayes_pls_golite062009
  • actinin binding
    		•  5.69539760434923 bayes_pls_golite062009
  • structural constituent of muscle
    		•  4.93896503565413 bayes_pls_golite062009
  • olfactory receptor activity
    		•  4.21057154107121 bayes_pls_golite062009
  • antigen binding
    		•  4.06466268219034 bayes_pls_golite062009
  • binding
    		•  3.17641566810715 bayes_pls_golite062009
  • receptor activity
    		•  3.0754311615326 bayes_pls_golite062009
  • peptide antigen binding
    		•  2.94721224577771 bayes_pls_golite062009
  • molecular transducer activity
    		•  2.92683710723714 bayes_pls_golite062009
  • signal transducer activity
    		•  2.92683710723714 bayes_pls_golite062009
  • fibroblast growth factor 1 binding
    		•  2.83860944503193 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  2.79758224858792 bayes_pls_golite062009
  • protein binding
    		•  2.22855404705168 bayes_pls_golite062009
  • IgG binding
    		•  1.92633562075074 bayes_pls_golite062009
  • receptor binding
    		•  1.70260377709721 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.58610597245454 bayes_pls_golite062009
  • actin binding
    		•  1.42681407553255 bayes_pls_golite062009
  • cell adhesion molecule binding
    		•  1.36789541796983 bayes_pls_golite062009
  • protein kinase activity
    		•  1.36635494500222 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.32330470851159 bayes_pls_golite062009
  • fibroblast growth factor binding
    		•  1.27793818082552 bayes_pls_golite062009
  • DNA binding
    		•  1.19412627500732 bayes_pls_golite062009
  • myosin light chain kinase activity
    		•  1.17845072849922 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.16252234499274 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.02286631988334 bayes_pls_golite062009
  • kinase activity
    		•  0.929878054374821 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.878595022643164 bayes_pls_golite062009
  • fibroblast growth factor receptor activity
    		•  0.84475532395276 bayes_pls_golite062009
  • actin filament binding
    		•  0.760856470721016 bayes_pls_golite062009
  • growth factor binding
    		•  0.715053526402219 bayes_pls_golite062009
  • collagen binding
    		•  0.635057461053063 bayes_pls_golite062009
  • titin binding
    		•  0.599892148302011 bayes_pls_golite062009
  • integrin binding
    		•  0.599569390248921 bayes_pls_golite062009
  • structural molecule activity
    		•  0.567620977360967 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.564762108830441 bayes_pls_golite062009
  • transcription factor activity
    		•  0.54549168007511 bayes_pls_golite062009
  • myosin heavy chain binding
    		•  0.49788128784685 bayes_pls_golite062009
  • protein complex binding
    		•  0.43131084085213 bayes_pls_golite062009
  • protein tyrosine kinase activity
    		•  0.318890055375093 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.0579247757286607 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5
    Term Confidence Notes
  • telethonin binding
    		•  5.81747667416248 bayes_pls_golite062009
  • structural constituent of muscle
    		•  5.71979489668015 bayes_pls_golite062009
  • ankyrin binding
    		•  4.69755754047169 bayes_pls_golite062009
  • alpha-actinin binding
    		•  4.57951951779666 bayes_pls_golite062009
  • actinin binding
    		•  4.57900103206288 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  3.79244614134061 bayes_pls_golite062009
  • receptor activity
    		•  3.73567137429359 bayes_pls_golite062009
  • cytokine binding
    		•  3.58426984827737 bayes_pls_golite062009
  • molecular transducer activity
    		•  3.5100441341515 bayes_pls_golite062009
  • signal transducer activity
    		•  3.5100441341515 bayes_pls_golite062009
  • cytokine receptor activity
    		•  3.25206686803048 bayes_pls_golite062009
  • protein binding
    		•  3.24522318184038 bayes_pls_golite062009
  • binding
    		•  3.12471204223368 bayes_pls_golite062009
  • growth factor binding
    		•  2.4970104838834 bayes_pls_golite062009
  • receptor binding
    		•  2.38673889309915 bayes_pls_golite062009
  • cell adhesion molecule binding
    		•  2.32179186005318 bayes_pls_golite062009
  • axon guidance receptor activity
    		•  2.01367445237355 bayes_pls_golite062009
  • prolactin receptor activity
    		•  1.9556649101819 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  1.85720106085239 bayes_pls_golite062009
  • interleukin-2 binding
    		•  1.67132604890013 bayes_pls_golite062009
  • glycosaminoglycan binding
    		•  1.56410665522466 bayes_pls_golite062009
  • interleukin-6 binding
    		•  1.53073516901486 bayes_pls_golite062009
  • interleukin-6 receptor activity
    		•  1.53073516901486 bayes_pls_golite062009
  • myosin light chain kinase activity
    		•  1.49217960276915 bayes_pls_golite062009
  • mercury ion binding
    		•  1.46191698606762 bayes_pls_golite062009
  • protein kinase activity
    		•  1.42856560840953 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.32813363771214 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.31663344632755 bayes_pls_golite062009
  • ciliary neurotrophic factor receptor activity
    		•  1.27192437373177 bayes_pls_golite062009
  • peptide hormone binding
    		•  1.2420090521345 bayes_pls_golite062009
  • actin binding
    		•  1.21472460452555 bayes_pls_golite062009
  • DNA binding
    		•  1.2006039770643 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  1.15899955607967 bayes_pls_golite062009
  • heparin binding
    		•  1.15000556789505 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  1.12142142875217 bayes_pls_golite062009
  • kinase activity
    		•  1.11027658115625 bayes_pls_golite062009
  • extracellular matrix structural constituent
    		•  1.1057194345531 bayes_pls_golite062009
  • cytokine activity
    		•  1.09433218752101 bayes_pls_golite062009
  • structural molecule activity
    		•  0.94240190391222 bayes_pls_golite062009
  • protein dimerization activity
    		•  0.86564366658585 bayes_pls_golite062009
  • growth hormone receptor activity
    		•  0.840187286074179 bayes_pls_golite062009
  • protein serine/threonine kinase activity
    		•  0.703490254739121 bayes_pls_golite062009
  • kinase binding
    		•  0.65927255037265 bayes_pls_golite062009
  • leukemia inhibitory factor receptor activity
    		•  0.628488391922279 bayes_pls_golite062009
  • oncostatin-M receptor activity
    		•  0.628488391922279 bayes_pls_golite062009
  • enzyme binding
    		•  0.60195860585095 bayes_pls_golite062009
  • collagen binding
    		•  0.593745877718282 bayes_pls_golite062009
  • identical protein binding
    		•  0.564711394496051 bayes_pls_golite062009
  • transcription factor activity
    		•  0.557290274937694 bayes_pls_golite062009
  • polysaccharide binding
    		•  0.54737137289904 bayes_pls_golite062009
  • cytokine receptor binding
    		•  0.47107517390107 bayes_pls_golite062009
  • pattern binding
    		•  0.44460010885883 bayes_pls_golite062009
  • growth factor activity
    		•  0.432629984792427 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.40600177052491 bayes_pls_golite062009
  • protein kinase binding
    		•  0.405060010394646 bayes_pls_golite062009
  • cell surface binding
    		•  0.366415248711076 bayes_pls_golite062009
  • interleukin-7 binding
    		•  0.301052531308189 bayes_pls_golite062009
  • protein heterodimerization activity
    		•  0.1430595594485 bayes_pls_golite062009
  • transcription activator activity
    		•  0.135753557343301 bayes_pls_golite062009
  • actin filament binding
    		•  0.135484838710405 bayes_pls_golite062009
  • protease binding
    		•  0.12595904253108 bayes_pls_golite062009
  • protein homodimerization activity
    		•  0.116391819218123 bayes_pls_golite062009
  • interleukin-2 receptor activity
    		•  0.115337814289139 bayes_pls_golite062009
  • integrin binding
    		•  0.0873424694168858 bayes_pls_golite062009
  • transcription factor binding
    		•  0.075900818564989 bayes_pls_golite062009
  • interleukin-11 binding
    		•  0.0423783987133706 bayes_pls_golite062009
  • interleukin-11 receptor activity
    		•  0.0423783987133706 bayes_pls_golite062009
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.
    9 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle