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Protein Overview: gi|109497787, gi...

General Information:
Name(s) found: gi|109498510 [NCBI NR]
gi|109497787 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|109498510|ref|XP_001053566.1| PREDICTED: similar to GLI-Kruppel family member GLI2a [Rattus norvegicus] [NCBI NR]
  • gi|109497787|ref|XP_222557.4| PREDICTED: similar to GLI-Kruppel family member GLI2a [Rattus norvegicus] [NCBI NR]
    • Organism: Rattus norvegicus
    Length: 1544 amino acids

    Gene Ontology:
    Cellular Component: membrane fraction [UNKNOWN]
    nucleus [UNKNOWN]
    cytoplasm [UNKNOWN]
    cilium [UNKNOWN]
    motile primary cilium [UNKNOWN]
    cellular_component [ND]
    intracellular [IEA]
    Biological Process: neural tube development [UNKNOWN]
    ventral spinal cord development [UNKNOWN]
    axon guidance [UNKNOWN]
    mammary gland duct morphogenesis [UNKNOWN]
    spinal cord dorsal/ventral patterning [UNKNOWN]
    branching morphogenesis of a tube [UNKNOWN]
    proximal/distal pattern formation [UNKNOWN]
    regulation of smoothened signaling pathway [UNKNOWN]
    dorsal/ventral pattern formation [UNKNOWN]
    embryonic digit morphogenesis [UNKNOWN]
    skeletal system development [UNKNOWN]
    embryonic gut development [UNKNOWN]
    in utero embryonic development [UNKNOWN]
    kidney development [UNKNOWN]
    hindbrain development [UNKNOWN]
    apoptosis [UNKNOWN]
    floor plate formation [UNKNOWN]
    dorsal/ventral neural tube patterning [UNKNOWN]
    biological_process [ND]
    cochlea morphogenesis [UNKNOWN]
    specification of segmental identity, maxillary segment [UNKNOWN]
    notochord regression [UNKNOWN]
    smoothened signaling pathway [UNKNOWN]
    pattern specification process [UNKNOWN]
    anatomical structure formation involved in morphogenesis [UNKNOWN]
    smoothened signaling pathway involved in dorsal/ventral neural tube patterning [UNKNOWN]
    pituitary gland development [UNKNOWN]
    prostatic bud formation [UNKNOWN]
    ventral midline development [UNKNOWN]
    epidermal cell differentiation [UNKNOWN]
    morphogenesis of an epithelium [UNKNOWN]
    cell proliferation [UNKNOWN]
    smoothened signaling pathway involved in regulation of granule cell precursor cell proliferation [UNKNOWN]
    positive regulation of cell proliferation [UNKNOWN]
    smoothened signaling pathway involved in ventral spinal cord interneuron specification [UNKNOWN]
    anatomical structure development [UNKNOWN]
    smoothened signaling pathway involved in spinal cord motor neuron cell fate specification [UNKNOWN]
    positive regulation of neuron differentiation [UNKNOWN]
    positive regulation of transcription [UNKNOWN]
    odontogenesis of dentine-containing tooth [UNKNOWN]
    positive regulation of DNA replication [UNKNOWN]
    positive regulation of transcription from RNA polymerase II promoter [UNKNOWN]
    cerebellar cortex morphogenesis [UNKNOWN]
    response to mechanical stimulus [IEP]
    negative regulation of transcription from RNA polymerase II promoter [UNKNOWN]
    heart development [UNKNOWN]
    osteoblast differentiation [UNKNOWN]
    lung development [UNKNOWN]
    tube development [UNKNOWN]
    osteoblast development [UNKNOWN]
    hindgut morphogenesis [UNKNOWN]
    spinal cord ventral commissure morphogenesis [UNKNOWN]
    developmental growth [UNKNOWN]
    neuron development [UNKNOWN]
    mammary gland development [UNKNOWN]
    cell differentiation [UNKNOWN]
    negative regulation of chondrocyte differentiation [UNKNOWN]
    Molecular Function: nucleic acid binding [IEA]
    DNA binding [UNKNOWN]
    transcription factor activity [UNKNOWN]
    zinc ion binding [UNKNOWN][IEA]
    protein binding [UNKNOWN]
    sequence-specific DNA binding [UNKNOWN]
    chromatin binding [UNKNOWN]
    promoter binding [UNKNOWN]
    transcription activator activity [UNKNOWN]
    molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 METSAQAPAL EKKEAKSGLL EDSSFPDPGK KACPLAVAAP AAAVAAQGVP QQLLPSFHVP  60
   61 LPIDMRHQEG RYHYDPHPVH GVHGPPTLSG SPVISDISLI RLSPHPAGPG ESPFSAHHPY 120
  121 MNPHMEHYLR SVHSSPTLSM ISAARGLSPA DVAHEHLKER GLFSLAAPGT NPSDYYHQMT 180
  181 LMASHPTPYG DILMQSGGAA SAPHLHDYLN PVDASRFSSP RVTPRLSRKR ALSISPLSDA 240
  241 SLDLQRMIRT SPNSLVAYIN NSRSSSAASG SYGHLSAGAL SPAFTFPHPI NPVAYQQILS 300
  301 QQRGLGSAFG HTPPLIQPSP TFLAQQPMTL TSITVPTQLG SNSSNCISDA NQNKQNSESA 360
  361 VSSTVNPITI HKRSKVKTEA EGLRPASPLG LTQEQLADLK EDLDRDDCKQ EAEVVIYETN 420
  421 CHWADCTKEY DTQEQLVHHI NNEHIHGEKK EFVCRWQACT REQKPFKAQY MLVVHMRRHT 480
  481 GEKPHKCTFE GCSKAYSRLE NLKTHLRSHT GEKPYVCEHE GCNKAFSNAS DRAKHQNRTH 540
  541 SNEKPYICKI PGCTKRYTDP SSLRKHVKTV HGPDAHVTKK QRNDVHLRAP LLKENGDNEA 600
  601 GAEPGGRGPE ESVEASSTSH TAEDCLHIKA IKTESSGLCQ SSPGAQSSCS SEPSPLGSVP 660
  661 NNDSGVEMPG TGPGSLGDLT ALDDTSPGAD TSALAVPSTG GLQLRKHMTT MHRFEQLKRE 720
  721 KLKSLKDSCS WAGPAPHTRN TKLPPLPVNG SVLENFNNTG GCGPAGLLPN QRLPELTEVT 780
  781 MLSQLQERRD SSTSTMSSAY TVSRRSSGIS PYFSSRRSSE ASPLGGIRPH NASSADSYDP 840
  841 ISTDASRRSS EASQCSGGGP GLLNLTPAQQ YSLRAKYAAA TGGPPPTPLP GLDRVSLRTR 900
  901 LALLDAPERA LPGACPQPLG PRRGSDGPTY NHGHGYVGAA PALPHEGPNG STRRASDPVR 960
  961 RPDPLVLPRV QRFHSIHNMN PGPLPPCTDR RGLHLQSHPS VDGSLTRHAY SPRPPSINEN1020
 1021 VVMEAVAAGV EGAGLESDLG LVEDDLVLPD DVVQYIKAHT GGALDDSTRQ VYPTEGTGFP1080
 1081 ENSKLPSPGL QGHRRLAAAD SNMSPSAPGL GGCQLSYSPS SSLNKSNMPV QWNEVSSGTV1140
 1141 DALPTQVKPP SFPQSNLVQQ KPAFAHYPGY SPQALQSGSG GLDSTQPHLQ LRGAPSASRG1200
 1201 SYTQQPRLPA TGSQCLGVTA AMSPQANYSQ THHQLSPNVV SGSLNQFAPS CSNMAAKPSH1260
 1261 LGLPQQMEVV PNATIISGHQ RELGIASSSL AAVSQPHPVL GYPQQDGYQQ VSGLPSSHQP1320
 1321 SFMESQQNTG FGLMQPRPPL EPNTASRHRG VRSGQQQQQL YARTAGQAVV TSANQETAEA1380
 1381 MPKGTAGTVV SLTPQPSQDT GRSQDQNTLY YYGQIHMYEQ NGGCPAMQPQ PPQPQGCSDN1440
 1441 IQPEPLPSPG VNQVSSTVDS QLLEPPQIDF DAIMDDGDHS SLFSGALSPS LLHNLSQNSS1500
 1501 RLTTPRNSLT LPSIPVGISN MAVGDMSSML TSLAEENKFL NMMT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data



    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle