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Protein Overview: YPR089W

General Information:
Name(s) found: YPR089W [SGD]
Description(s) found:
Found 21 descriptions.
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  • Protein of unknown function; exhibits genetic interaction with ERG11 and protein-protein interaction with Hsp82p [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 888 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSVWDDARI EDRTVDKPVG SSHAQEKLAL VKSTLFKLDQ EDRPECDSWV QLVKLICDED  60
   61 REEEFTTFKE LLREVKNVND KSVTGVALIH YIIVFDRADY IELLHDNPSG AKLDLNLVDD 120
  121 IVGYTPLMWS FSLQRRNCCL ELFNAFDEIN FNMTNKAGLT AWDMVPPYSP LSEFLEQNNM 180
  181 FRYRTEVKHE IPQISQPKDT SLLMSNEDST TKETFDNIDL QVAGLTLSPG ANDNMFLDSD 240
  241 EKNMNHSQGA ATLIDPTYTE DYHGTFDYDK LSPDQYLEFS DFDIPQILNL LISLPQKEPH 300
  301 MTTYPAGLIY QCIRYADHKI KSKPLVESLI NLSLTKILTS VSSNGAAGLV STEASLQAGD 360
  361 IVLQSYWLSC LSFLYYYLCR DDSFFKRHPS VLQELINTIH SIIIELTSSI HCRLISLIDS 420
  421 TLLAYTTIQD VKQTLYKRDW NFFKKRKQAK LLLKEKNRKQ LKEQQKKELH RKSQGQENHE 480
  481 EEEGQQDGND SDDRASTNDD NNSSVSLFYD KEILRHLYPP SFEEQMKPSP LKIVQIFGAL 540
  541 SYVLNLHQTH PIFQQQCLSI SVNWFATTLF NKILKDKKKR SLSRAHAIQI RLNLSTLESW 600
  601 IQNNDFCVPK PMLIDDFMWQ RFPMTLIRDV GEIDLSDPIL RNVATYKPID ENNKDLIYDT 660
  661 SNSLFYYQPF HKIAQIHLEP VFQLLQWLQV ATTLDSEESL ISTMNLLPRI TPVQLLKSME 720
  721 KYNYELNENK FNSKLKKFLN NKIKDSKMSK ADAYLQEHEI PYLVLPTIPE MTDLYSKGPD 780
  781 SHSFQPFLPG SIQDDVYEIH DVNFKQRQNE PQISRTNSGT SDFTGDEDKA QYETEGVGES 840
  841 IDINETVEPE SNAFNVGNDD YFKELNIPSS TAQRPAWSNN DDMEQNPW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen YOR203W YPR089W 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YPR089W and CHC1 Huh WK, et al. (2003)
    View Data YPR089W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..471] PSI-BLAST 68.045757 Ankyrin-R
    2 View Details [472..706] PSI-BLAST 45.30103 Myosin V cargo binding domain
    3 View Details [707..888] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.329297728713027 bayes_pls_golite062009
  • protein binding
    		•  0.185260661660339 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle