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Protein Overview: RDS3

General Information:
Name(s) found: RDS3 / YPR094W [SGD]
Description(s) found:
Found 27 descriptions.
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  • Component of the SF3b subcomplex of the U2 snRNP, zinc cluster protein involved in pre-mRNA splicing and cycloheximide resistance [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 107 amino acids

    Gene Ontology:
    Cellular Component: spliceosomal complex [TASLink to PubMed article]
    U2 snRNP [IDALink to PubMed article]
    Biological Process: response to xenobiotic stimulus [IMPLink to PubMed article]
    nuclear mRNA splicing, via spliceosome [IGILink to PubMed article][IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRHQFDLIM CLKQPGVQTG LLCEKCDGKC PICDSYVRPK RKVRVCENCS FGKQAKNCII  60
   61 CNLNVGVNDA FYCWECCRLG KDKDGCPRIL NLGSNRLDRH FEKKKKV

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) CUS1 IST3 LEA1 PRP9 RDS3 RSE1

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..107] FFAS03 1.09 Solution structure of PHD domain in nucleic acid binding protein-like NP_197993


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle