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Protein Overview: YOR287C

General Information:
Name(s) found: YOR287C [SGD]
Description(s) found:
Found 26 descriptions.
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  • Component of 90S preribosomes; involved in early cleavages of the 35S pre-rRNA and in production of the 40S ribosomal subunit [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 300 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: maturation of SSU-rRNA [IMPLink to PubMed article]
    ribosome biogenesis [RCALink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYYFKNLKP DLNSDVEEDD GNLLESIMAN KSKREIDEQE SSDDELKTLS FGSLKKAETV  60
   61 IDEEDFKDTK PVHKKPITTT YREESFDEDE DSEDQSDEDA GFFEEDSEDE THHGQKVPKK 120
  121 KSKHAPVEQS SKKRVPRVRN IPGLEIPRNK RSNLYQDIRF DKSTGKALDS SIIRKRYQFL 180
  181 DEYREKEIDE LQKLLQERKF LSKIDQGERE EMEQRLKSMK SRLQSMKNKD LEREILKEYE 240
  241 NDMNKNNNTR YHLKKSEKRK VVQKWKFDHM KAKQREKVME RKRKKRLGKE FKQFEFHNRR 300
  301

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) CAF20 CDC33 EAP1 PSP2 SLF1 TIF1, TIF2 TIF4631 TIF4632 YOR287C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #06 Alpha Factor Prep3-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen YOR287C SLX5 2 Hazbun TR, et al. (2003)
    View Screen YOR287C YDR026C 2 Hazbun TR, et al. (2003)
    View Screen YOR287C FIR1 2 Hazbun TR, et al. (2003)
    View Screen YOR287C SPO21 2 Hazbun TR, et al. (2003)
    View Screen YOR287C ERP4 2 Hazbun TR, et al. (2003)
    View Screen YOR287C NOP53 2 Hazbun TR, et al. (2003)

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..300] Pcons 1.71 Tropomyosin


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle