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Protein Overview: TMA46

General Information:
Name(s) found: TMA46 / YOR091W [SGD]
Description(s) found:
Found 18 descriptions.
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  • Protein of unknown function that associates with ribosomes; interacts with GTPase Rbg1p [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 401 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    ribosome [IDALink to PubMed article]
    Biological Process: ribosome biogenesis [RCALink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIMKKFLFPS DELVKIDNIS FFNQCVLLFL ESKGSHSISK PLGFTHIKSQ ESYISKMPPK  60
   61 KGKQAQAAGK KKDNVDKTFG MKNKNRSTKV QKYIKQVQSQ SDPKKEEMRL KKLEEKKRRE 120
  121 AEEAERRALF NPVADQRVRA GVDPKSMVCA LFKLGNCNKG AKCKFSHDLN VGRRMEKKDL 180
  181 YQDTRSEKEN DTMDNWDEEK LRKVILSKHG NPKTTTDKVC KYFIEAVENG KYGWFWICPN 240
  241 GGDKCMYRHS LPEGFVLKTN EQKRLERESL EKQPKITLEE FIETERGKLD KSKLTPITIA 300
  301 NFAQWKKDHV IAKINAEKKL SSKRKPTGRE IILKMSAENK SFETDNADMP DDVTQGSAWD 360
  361 LTEFTDALKK ADHQDDGGIK DYGDGSNPTF DIKKANSATL A

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen CDC48 TMA46 1 Unpublished Fields Lab Data
    View Screen CDC53 TMA46 1 Unpublished Fields Lab Data
    View Screen UBC7 TMA46 1 Unpublished Fields Lab Data
    View Screen CTF13 TMA46 1 Unpublished Fields Lab Data
    View Screen PPG1 TMA46 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..401] MSA 4.012952 View MSA. No confident structure predictions are available.
    2 View Details [130..292] FFAS03 1.64 Solution Structure of the Zinc-finger domain in KIAA1064 protein
    3 View Details [293..401] deduced N/A No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle