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Protein Overview: YNL247W

Protein Complex Data

  PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
View Details Krogan NJ, et al. (2006) GSP1 SRM1 YNL247W

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

  BAIT PREY HITS PUBLICATION
View Screen MLC1 YNL247W 2 Unpublished Fields Lab Data
View Screen DCN1 YNL247W 2 Unpublished Fields Lab Data

Microscopy / Localization Data

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  PROTEIN(S) PUBLICATION
View Data YNL247W Huh WK, et al. (2003)

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..153] PSI-BLAST 2.045757 No description for 1lleA_ was found.
2 View Details [154..419] PSI-BLAST 588.54902 Cysteinyl-tRNA synthetase (CysRS)
3 View Details [420..474] PSI-BLAST 588.54902 Cysteinyl-tRNA synthetase (CysRS)
4 View Details [475..664] PSI-BLAST 588.54902 Cysteinyl-tRNA synthetase (CysRS)
5 View Details [665..767] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2
Term Confidence Notes
  • ligase activity, forming aminoacyl-tRNA and related compounds
  • 7.16276509815667 bayes_pls_golite062009
  • ligase activity, forming carbon-oxygen bonds
  • 7.16276509815667 bayes_pls_golite062009
  • aminoacyl-tRNA ligase activity
  • 7.13957775963187 bayes_pls_golite062009
  • ligase activity
  • 6.11211476973434 bayes_pls_golite062009
  • cysteine-tRNA ligase activity
  • 5.23703961447809 bayes_pls_golite062009
  • isoleucine-tRNA ligase activity
  • 3.76808520367507 bayes_pls_golite062009
  • glutamate-tRNA ligase activity
  • 2.63681738794687 bayes_pls_golite062009
  • catalytic activity
  • 2.37674226834122 bayes_pls_golite062009
  • methionine-tRNA ligase activity
  • 2.01261843164558 bayes_pls_golite062009
  • tyrosine-tRNA ligase activity
  • 1.88984817882585 bayes_pls_golite062009
  • tryptophan-tRNA ligase activity
  • 1.14187887833901 bayes_pls_golite062009
  • arginine-tRNA ligase activity
  • 1.13743634264647 bayes_pls_golite062009
  • nucleotidyltransferase activity
  • 0.89131347796645 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
  • 0.625793556381714 bayes_pls_golite062009
  • nucleic acid binding
  • 0.369886886936128 bayes_pls_golite062009
  • RNA binding
  • 0.306683553109855 bayes_pls_golite062009
  • glutamine-tRNA ligase activity
  • 0.118292082006187 bayes_pls_golite062009
  • binding
  • 0.090743795600025 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle