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Protein Overview: YMR155W

General Information:
Name(s) found: YMR155W [SGD]
Description(s) found:
Found 21 descriptions.
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  • Putative protein of unknown function; identified as interacting with Hsp82p in a high-throughput two-hybrid screen [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 547 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVKKHQNSKM GNTNHFGHLK SFVGGNVVAL GAGTPYLFSF YAPQLLSKCH IPVSASSKLS  60
   61 FSLTIGSSLM GILAGIVVDR SPKLSCLIGS MCVFIAYLIL NLCYKHEWSS TFLISLSLVL 120
  121 IGYGSVSGFY ASVKCANTNF PQHRGTAGAF PVSLYGLSGM VFSYLCSKLF GENIEHVFIF 180
  181 LMVACGCMIL VGYFSLDIFS NAEGDDASIK EWELQKSRET DDNIVPLYEN SNDYIGSPVR 240
  241 SSSPATYETY ALSDNFQETS EFFALEDRQL SNRPLLSPSS PHTKYDFEDE NTSKNTVGEN 300
  301 SAQKSMRLHV FQSLKSSTFI GYYIVLGILQ GVGLMYIYSV GFMVQAQVST PPLNQLPINA 360
  361 EKIQSLQVTL LSLLSFCGRL SSGPISDFLV KKFKAQRLWN IVIASLLVFL ASNKISHDFS 420
  421 SIEDPSLRAS KSFKNISVCS AIFGYSFGVL FGTFPSIVAD RFGTNGYSTL WGVLTTGGVF 480
  481 SVSVFTDILG RDFKANTGDD DGNCKKGVLC YSYTFMVTKY CAAFNLLFVL GIIGYTYYRR 540
  541 RATANSL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) AVT2 HOS4 SIF2 SNT1 TFP1 TRM3 UTP21 YMR155W YRF1-3, YRF1-7 ZDS2

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #19 Asynchronous Prep1-TiO2 Phosphopeptide enrichment Keck JM, et al. (2011)
    View Run MLP2 #19b Asynchronous Prep1-new search criteria Keck JM, et al. (2011)
    View Run MLP2 #19a Asynchronous Prep1-new search criteria Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen PRP42 YMR155W 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..271] PSI-BLAST 3.522879 No description for 1lviA_ was found.
    2 View Details [272..335] deduced N/A No confident structure predictions are available.
    3 View Details [336..547] MSA 5.879996 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.3426261924492 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.29689809004391 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.15783210522667 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  1.94035843948137 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.5181741634556 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • binding
    		•  1.01584233411372 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle