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Protein Overview: SSP120

General Information:
Name(s) found: SSP120 / YLR250W [SGD]
Description(s) found:
Found 31 descriptions.
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  • Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 234 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: protein secretion [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLRGFVFS LAFTLYKVTA TAEIGSEINV ENEAPPDGLS WEEWHMDHEH QLKDYTPETF  60
   61 FALHDIKKKG FLDENDILSL YGLNREEIVG AGDGMGQHDE SEKIDNEMAK RVVSLIMRLL 120
  121 DVDDNTKITK EEYLQFAKRG NKFPDLGVGV GHHSDFELEY EIHHWNKFHK DKDPDVKVVH 180
  181 KEDIEHELLH HEHEIEHEEE IQRGASRATV ITDDELESRI ELKNIPEKFK NGIF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run TOR2 No Comments Reinke A, et al. (2004)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen RAD51 SSP120 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data SSP120 Huh WK, et al. (2003)
    View Data SSP120 and COP1 Huh WK, et al. (2003)
    View Data SSP120 and ANP1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..144] PSI-BLAST 11.0 Neurocalcin
    2 View Details [145..234] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.15717243331439 bayes_pls_golite062009
  • ion binding
    		•  0.260156747006827 bayes_pls_golite062009
  • cation binding
    		•  0.258202247784115 bayes_pls_golite062009
  • metal ion binding
    		•  0.258202247784115 bayes_pls_golite062009
  • calcium ion binding
    		•  0.256031066757318 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle