YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	SSP120
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLRGFVFS LAFTLYKVTA TAEIGSEINV ENEAPPDGLS WEEWHMDHEH QLKDYTPETF  60
   61 FALHDIKKKG FLDENDILSL YGLNREEIVG AGDGMGQHDE SEKIDNEMAK RVVSLIMRLL 120
  121 DVDDNTKITK EEYLQFAKRG NKFPDLGVGV GHHSDFELEY EIHHWNKFHK DKDPDVKVVH 180
  181 KEDIEHELLH HEHEIEHEEE IQRGASRATV ITDDELESRI ELKNIPEKFK NGIF

Type	Start	End	Confidence
Signal Peptide	1	22	0.96
N-region	1	13
H-region	14	19
C-region	20	22
Cleavage Site	22	23
Non-Cytoplasmic	23	234	0.99