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Protein Overview: YKR018C

General Information:
Name(s) found: YKR018C [SGD]
Description(s) found:
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  • gi|6322870|ref|NP_012943.1| Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; Ykr018cp [Saccharomyces cerevisiae] [NCBI NR]
  • gi|549770|sp|P36114.1|YKR18_YEAST RecName: Full=Mitochondrial outer membrane protein YKR018C [NCBI NR]
  • pir||S38087 hypothetical protein YKR018c - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • gi|486437|emb|CAA82090.1| unnamed protein product [Saccharomyces cerevisiae] [NCBI NR]
  • Uncharacterized protein YKR018C - Saccharomyces cerevisiae (Baker's yeast) [Swiss-Prot]
  • Mitochondrial outer membrane protein YKR018C OS=Saccharomyces cerevisiae GN=YKR018C PE=1 SV=1 [Swiss-Prot]
  • Protein of unknown function localised to cytoplasm and nucleus [mips]
  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus [SGD]
  • YKR018C, Chr XI from 473361-475538, reverse complement [yeast_orfs2]
  • Chr XI from 473361-475538, reverse complement [yeastorf3.fasta]
  • Chr XI from 475538-473361, reverse complement [yeastorf5.fasta]
  • (P36114) Hypothetical 81.8 kDa protein in YPT52-DBP7 intergenic region [4932.FASTACCERV.txt]
  • YKR018C SGDID:S0001726, Chr XI from 475543-473366, reverse complement, Uncharacterized ORF [yeastflysequest.fasta]
  • Ykr018cp [Saccharomyces cerevisiae]gi|486437|emb|CAA82090.1| unnamed protein product [Saccharomyces cerevisiae]gi|539236|pir||S38087 hypothetical protein YKR018c - yeast (Saccharomyces cerevisiae)gi|549770|sp|P36114|YKZ8_YEAST HYPOTHETICAL 81.8 KDA PRO [nrdb_11152004_Chlamydomonas]
  • YKR018C SGDID:S000001726, Chr XI from 475543-473366, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus" [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; Ykr018cp [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • unnamed protein product [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Uncharacterized protein YKR018C [nr-271106-contam.fasta]
  • [chemostatdb.fasta]
  • Mitochondrial outer membrane protein YKR018C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YKR018C PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • YKR018C SGDID:S000001726, Chr XI from 475900-473723, Genome Release 64-1-1, reverse complement, Uncharacterized ORF, "Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus" [yeast-030211-contam.fasta]
  • YKR018C SGDID:S000001726, Chr XI from 475900-473723, Genome Release 64-2-1, reverse complement, Verified ORF, "Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; protein abundance increases in response to DNA replication stress; YKR018C has a paralog, IML2, that arose from the whole genome duplication" [20141208_orf_trans.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 725 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFKVFGFGAK EEIPELSQEE KTKAILKQAH DFEQALRAMD YVLDDNADEG LALLDESDAK  60
   61 EASDQTINAL ARGVIEFLEA TLGFEAEEMK KASATLAKAE ALSLKSRERA QKIGLKSSSL 120
  121 YPPGTVYAVT YTESCLLHAL LMIFSESMME AAKAILKLRK SYYMLQEILE TIKAANKAKK 180
  181 LKITSGSEDK ESTPATFITG GDAFNSVDIP YELTPEEQKD KDLLQFAEQI HSMRTERLSG 240
  241 AHIGNSPAIN RLRGELGLQA MEDLPEEEIT DHKVLSDDID LSQATIDEFV HSGVNLCFGI 300
  301 LQVVISLLPP AIGAVLSVVG FRGSREEGLR LVWKATKQRN VHGCIGLLAL MFYYDGPFQF 360
  361 TDDDFDIPAA VKDSSNSEDS EDEEMDGPTL LHPGKILEDA LLQSRALFPN SALWLLNEAR 420
  421 MLSGKGRLEE AVALMDSIDV SKIRMRQVKS LMIFDRAITL IHLHQYDRAA EDILSLLDIS 480
  481 DWSHAFYTYF AGCCYLENWR MCEMGLMKSD KKDEYQKKAE ELIFTSVNLL GKKTFKSKNL 540
  541 PLDRFILRKV EQFKAKKEEL GVENPLDGIA TSPVHEIAYF YNGYNRMSEE HLELTKKMLT 600
  601 EYRNPAIEAL DSDQELIKDL LVSLTLRRLG HIQEGCDILD EKVLPKFFSI QNGKVKYIKK 660
  661 TEDPWAYPTA LYERALFTWK LEGMDGLPES KEWLLRAQGY ADDYELSTRV GMKIKAAIDR 720
  721 VDHSL

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Ho Y, et al. (2002) ART10 BUL1 HXT6 LSB1 PHO84 RNQ1 RPB3 RPB5 RPO21 RPO26 RSP5 YKR018C

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #29 Asynchronous Prep5-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen RAD51 YKR018C 1 Unpublished Fields Lab Data
    View Screen FAR10 YKR018C 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YKR018C Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..183] MSA 3.011969 View MSA. No confident structure predictions are available.
    2 View Details [184..363] deduced N/A No confident structure predictions are available.
    3 View Details [364..456] ORFEUS 10.57 Transcription factor MalT domain III
    4 View Details [457..576] ORFEUS 10.57 Transcription factor MalT domain III
    5 View Details [577..725] ORFEUS 10.57 Transcription factor MalT domain III


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle