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Protein Overview: YKL069W

General Information:
Name(s) found: YKL069W [SGD]
Description(s) found:
Found 33 descriptions.
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  • Methionine-R-sulfoxide reductase, reduces the R enantiomer of free Met-SO, in contrast to Ycl033Cp which reduces Met-R-SO in a peptide linkage; has a role in protection against oxidative stress [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 180 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGSSTGFHHA DHVNYSSNLN KEEILEQLLL SYEGLSDGQV NWVCNLSNAS SLIWHAYKSL  60
   61 AVDINWAGFY VTQASEENTL ILGPFQGKVA CQMIQFGKGV CGTAASTKET QIVPDVNKYP 120
  121 GHIACDGETK SEIVVPIISN DGKTLGVIDI DCLDYEGFDH VDKEFLEKLA KLINKSCVFK 180
  181

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Krogan NJ, et al. (2006) HCH1 HOR2 LIF1 PIG2 YBR139W YKL069W

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data YKL069W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..61] PSI-BLAST 1081.0 Hypothetical protein ykl069wp
    2 View Details [62..180] PSI-BLAST 1081.0 Hypothetical protein ykl069wp

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.10915247373974 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.5060301152751 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.32736924614801 bayes_pls_golite062009
  • DNA binding
    		•  1.31562572870243 bayes_pls_golite062009
  • transcription factor activity
    		•  1.09596276636897 bayes_pls_golite062009
  • protein binding
    		•  0.0688725708976988 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle