Protein Overview: YJR149W

General Information:
Name(s) found:	YJR149W [SGD]
Description(s) found: Found 23 descriptions. SHOW ALL	Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm [SGD]
Organism:	Saccharomyces cerevisiae
Length:	404 amino acids
Gene Ontology:
Cellular Component:	cytoplasm [IDA]
Biological Process:	biological_process [ND]
Molecular Function:	molecular_function [ND]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MYFLNQLIFQ DVSVMSVDKR EDMSRSFQKC LNLRYPIIQA PMAGVTTIEM AAKACIAGAI  60
   61 ASLPLSHLDF RKVNDIEKLK LMVSQFRDQV ADESLEGNLN LNFFCHDIVD KPTDLQTANW 120
  121 AKLYRKSMNV PIDMNEIKFD NGNVSFKAFE KENALQDFFQ YLSDGFRPKI ISFHFGHPSK 180
  181 STIEYLQKIG ILIFVTATSV REVRLLARLG INGIVCQGYE AGGHRGNFLV NDPKDDENLS 240
  241 TVQLVKRTVD ELAEMKNKGL IHATPFVIAA GGIMDSKDIS YMLSQQADAV QVGTAFLGCS 300
  301 ESNASKNFSS PFTRETTTKM VNIISGKPAR TISTPFIEKV IANFQGEELP PYGYMYSAFK 360
  361 QVRKKYPELA NFILAGQGFQ NVQSGITTDK KIETMGARLK IVGK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

The following runs contain data for this protein:

	BAIT	COMMENTS	PUBLICATION
View Run	RPA135	No Comments	Schneider, DA, et al. (2006)

Yeast Two-Hybrid Data

The following interactions contain this protein:

SHOWING SINGLE HITS. [ Hide Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

	BAIT	PREY	HITS	PUBLICATION
View Screen	SPT23	YJR149W	1	Unpublished Fields Lab Data
View Screen	UBC7	YJR149W	1	Unpublished Fields Lab Data

Microscopy / Localization Data

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	PROTEIN(S)	PUBLICATION
View Data	YJR149W	Huh WK, et al. (2003)

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..404]	PSI-BLAST	70.522879	Inosine monophosphate dehydrogenase (IMPDH); Type II inosine monophosphate dehydrogenase

Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.90

Source: Reynolds et al. (2008)

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2