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Protein Overview: JJJ3

General Information:
Name(s) found: JJJ3 / YJR097W [SGD]
Description(s) found:
Found 29 descriptions.
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  • Protein of unknown function, contains a J-domain, which is a region with homology to the E. coli DnaJ protein [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 172 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    cytoplasm [IDALink to PubMed article]
    Biological Process: peptidyl-diphthamide biosynthetic process from peptidyl-histidine [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSLVNSLTHY EILRIPSDAT QDEIKKAYRN RLLNTHPDKL SKSIHDTVSN VTINKIQDAY  60
   61 KILSNIKTRR EYDRLILENY KRQGFHNCGD GLDEFSLDDF SFDEDKLEFM MNCPRCQFVG 120
  121 GFHFSESLLD ECIDNVDAME RSHSGYQLLT QCSACSLWLK VNFDIEEEQE GQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #26 Asynchronous Prep4-TiO2 Phosphopeptide enriched, Steps1-2 Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data JJJ3 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..172] PSI-BLAST 67.616428 DnaJ chaperone, N-terminal (J) domain
    2 View Details [115..172] FFAS03 1.37 Solution structure of the mouse DESR1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  2.03854863870179 bayes_pls_golite062009
  • protein binding
    		•  1.59319415069732 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.2131700498174 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.12971478797926 bayes_pls_golite062009
  • DNA binding
    		•  0.8788643398536 bayes_pls_golite062009
  • unfolded protein binding
    		•  0.26936882742456 bayes_pls_golite062009
  • catalytic activity
    		•  0.106988907594358 bayes_pls_golite062009
  • protein kinase activity
    		•  0.0820836328401214 bayes_pls_golite062009
  • heat shock protein binding
    		•  0.0438718605428136 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  1.49983036545301 bayes_pls_golite062009
  • protein binding
    		•  0.535832402793455 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle