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Protein Overview: YJL213W

General Information:
Name(s) found: YJL213W [SGD]
Description(s) found:
Found 28 descriptions.
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  • Protein of unknown function that may interact with ribosomes; periodically expressed during the yeast metabolic cycle; phosphorylated in vitro by the mitotic exit network (MEN) kinase complex, Dbf2p/Mob1p [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 331 amino acids

    Gene Ontology:
    Cellular Component: ribosome [IDALink to PubMed article]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLMPKSVALL RIRYTLEAAL ARGFTTVRDC GGAEGFLKAE IRQGSLNGPR LITCGHAISQ  60
   61 TGGHGDLRSG ALPASAFDSC SCHFGQVGVV ADGVPECYKA AREEFRRGAD FIKIMGGGGV 120
  121 ASPTDKISNK QFCDDEIKAL VDVANSYHTY VTAHAYTAEA IQNCIKLGVK GIEHGNLLDE 180
  181 RTAELMAELG CYLTPTLVTY KVMGSDQFSA FLGPENSRKN TEVLYKGIDA MKIAQKKKVK 240
  241 ICFGSDLLGP LYGYQTQEFR IRGKVQTTQE ILLSATVTPA EMNGLGDKLG QIKPGFIADL 300
  301 LMMKSNPLDD ITILDEPESN ILFVMKEGRI Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run MLP2 #31 Asynchronous Prep (Protease cleavage) Keck JM, et al. (2011)
    View Run MLP2 #03 Alpha Factor Prep1-TiO2 Flowthrough Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen YIF1 YJL213W 2 Unpublished Fields Lab Data

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..331] PSI-BLAST 40.0 alpha-Subunit of urease; alpha-subunit of urease, catalytic domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity
    		•  1.3383791442796 bayes_pls_golite062009
  • catalytic activity
    		•  0.935564737557247 bayes_pls_golite062009


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle