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Protein Overview: CHS6

General Information:
Name(s) found: CHS6 / YJL099W [SGD]
Description(s) found:
Found 30 descriptions.
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  • Member of the ChAPs family of proteins (Chs5p-Arf1p-binding proteins: Bch1p, Bch2p, Bud7p, Chs6p), that forms the exomer complex with Chs5p to mediate export of specific cargo proteins, including Chs3p, from the Golgi to the plasma membrane [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 746 amino acids

    Gene Ontology:
    Cellular Component: trans-Golgi network transport vesicle [IDALink to PubMed article]
    clathrin-coated vesicle [IDALink to PubMed article]
    Biological Process: Golgi to plasma membrane transport [IGILink to PubMed article][IMPLink to PubMed articleLink to PubMed article]
    cell wall chitin biosynthetic process [IMPLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLFWPSETK KQNEIPGGDY TPGNSPSVQK GYQFLNRDIF KSCPRIMERQ FGECLHNRTH  60
   61 LIKDLISSGN VGLGPIEIVH MSYLNKHEKE EFGEYFYVTG IEVSGPAMPV EFLEVLKSSK 120
  121 RISKNISNNI ILTYCCFNFF SNLDIRIRYD ADDTFQTTAI DCNKETTDLT MTEKMWEETF 180
  181 ASSVIRAIIT NTNPELKPPG LVECPFYVGK DTISSCKKII ELLCRFLPRS LNCGWDSTKS 240
  241 MQATIVNNYL MYSLKSFIAI TPSLVDFTID YLKGLTKKDP IHDIYYKTAM ITILDHIETK 300
  301 ELDMITILNE TLDPLLSLLN DLPPRDADSA RLMNCMSDLL NIQTNFLLNR GDYELALGVS 360
  361 NTSTELALDS FESWYNLARC HIKKEEYEKA LFAINSMPRL RKNDGHLETM YSRFLTSNYY 420
  421 KKPLNGTREH YDLTAMEFTN LSGTLRNWKE DELKRQIFGR IAMINEKKIG YTKEIWDDIA 480
  481 IKLGPICGPQ SVNLINYVSP QEVKNIKNIN LIARNTIGKQ LGWFSGKIYG LLMEIVNKIG 540
  541 WNGLLNIRTE AFMMETEFYQ ASNNIIDENG HIPMESRKKR FCEGWLDDLF LDLYQDLKLS 600
  601 KISLSNKDEK HSGLEWELLG LIMLRTWHWE DAVACLRTSI VARFDPVSCQ QLLKIYLQPP 660
  661 KNIQEVTLLD TDTIISLLIK KISYDCRYYN YCQIFNLQLL EKLCNELGTH ILRNKILLQP 720
  721 SIGDEIMVMI DAMLAWIADL DHTVQP

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Gavin AC, et al. (2006) BCH1 BUD7 CHS5 CHS6
    View Details Qiu et al. (2008) BCH1 BCH2 BUD7 CHS6 SEC4 YOS1

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data CHS6 Huh WK, et al. (2003)
    View Data CHS6 and CHC1 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..199] deduced N/A No confident structure predictions are available.
    2 View Details [200..487] MSA 1.007942 View MSA. No confident structure predictions are available.
    3 View Details [488..746] MSA 1.007898 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.97

    Source: Reynolds et al. (2008)

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    Created and Maintained by: Michael Riffle