YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PEX10

General Information:
Name(s) found: PEX10 / YDR265W [SGD]
Description(s) found:
Found 27 descriptions.
SHOW ALL
  • Peroxisomal membrane E3 ubiquitin ligase required for for Ubc4p-dependent Pex5p ubiquitination and peroxisomal matrix protein import; contains zinc-binding RING domain; mutations in human homolog cause various peroxisomal disorders [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 337 amino acids

    Gene Ontology:
    Cellular Component: peroxisomal membrane [TASLink to PubMed article]
    Biological Process: peroxisome organization [TAS]
    Molecular Function: protein binding [TASLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKNDNKLQKE ALMRLSQLRF PFADAPSIVQ AHQKDEQIQG LLIMKVTELC KLIKSQLFVN  60
   61 SYPKELSIFA KLLYLLFTTG RRGRTLGEEY VDLTYTNRKG TRLAGRLKMI VFAFAYPLCP 120
  121 YFITKLYKKI MKNNKESKIE DTESVAAFCK GLLDFILDVH MTLFYFKGAF YSISKRIFGM 180
  181 RYVFKHILSK NEANFREEGS QKYKVLGYIL LAQNVMKWYP VLTSTLGSWI YGRKRTNDSI 240
  241 TRSSVGLQER SEHESIEGIP KESQLTHINL SDKNQLPFIP EASRKCILCL MNMSDPSCAP 300
  301 CGHLFCWSCL MSWCKERPEC PLCRQHCQPQ EILVLRQ

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) PEX10 PEX12 PEX13 PEX14 PEX17 PEX3 PEX5

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen PEX10 YCL056C 2 Unpublished Fields Lab Data
    View Screen PEX15 PEX10 2 Unpublished Fields Lab Data
    View Screen PEX10 PRS4 1 Unpublished Fields Lab Data
    View Screen PEX10 UMP1 1 Unpublished Fields Lab Data
    View Screen PEX10 YDL050C 1 Unpublished Fields Lab Data
    View Screen PEX10 ATC1 1 Unpublished Fields Lab Data
    View Screen PEX10 UTP25 1 Unpublished Fields Lab Data
    View Screen PEX10 DJP1 1 Unpublished Fields Lab Data
    View Screen PEX4 PEX10 1 Unpublished Fields Lab Data
    View Screen FAR10 PEX10 1 Unpublished Fields Lab Data
    View Screen UBC7 PEX10 1 Unpublished Fields Lab Data
    View Screen SEC17 PEX10 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data PEX10 and PEX3 Huh WK, et al. (2003)
    View Data PEX10 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [102..285] PSI-BLAST 77.24799 Cbl; N-terminal domain of cbl (N-cbl); CBL
    3 View Details [286..337] PSI-BLAST 77.24799 Cbl; N-terminal domain of cbl (N-cbl); CBL

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleic acid binding
    		•  1.94188352248723 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.79

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle