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Protein Overview: UBC9

General Information:
Name(s) found: UBC9 / YDL064W [SGD]
Description(s) found:
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  • gi|634089|emb|CAA57888.1| ubiquitin-conjugating enzyme [Saccharomyces cerevisiae] [NCBI NR]
  • gi|6320139|ref|NP_010219.1| SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome [NCBI NR]
  • gi|1717862|sp|P50623.1|UBC9_YEAST RecName: Full=SUMO-conjugating enzyme UBC9; AltName: Full=Ubiquitin-conjugating enzyme E2-18 kDa; AltName: Full=Ubiquitin-protein ligase; AltName: Full=Ubiquitin carrier protein 9 [NCBI NR]
  • gi|149241625|pdb|2EKE|B Chain B, Structure Of A Sumo-Binding-Motif Mimic Bound To Smt3p- Ubc9p: Conservation Of A Noncovalent Ubiquitin-Like Protein-E2 Complex As A Platform For Selective Interactions Within A Sumo Pathway [NCBI NR]
  • gi|149241624|pdb|2EKE|A Chain A, Structure Of A Sumo-Binding-Motif Mimic Bound To Smt3p- Ubc9p: Conservation Of A Noncovalent Ubiquitin-Like Protein-E2 Complex As A Platform For Selective Interactions Within A Sumo Pathway [NCBI NR]
  • gi|1431070|emb|CAA98629.1| UBC9 [Saccharomyces cerevisiae] [NCBI NR]
  • gi|110590310|pdb|2GJD|D Chain D, Distinct Functional Domains Of Ubc9 Dictate Cell Survival And Resistance To Genotoxic Stress [NCBI NR]
  • gi|110590309|pdb|2GJD|C Chain C, Distinct Functional Domains Of Ubc9 Dictate Cell Survival And Resistance To Genotoxic Stress [NCBI NR]
  • gi|110590308|pdb|2GJD|B Chain B, Distinct Functional Domains Of Ubc9 Dictate Cell Survival And Resistance To Genotoxic Stress [NCBI NR]
  • gi|110590307|pdb|2GJD|A Chain A, Distinct Functional Domains Of Ubc9 Dictate Cell Survival And Resistance To Genotoxic Stress [NCBI NR]
  • gi|1093105|prf||2102354A ubiquitin-conjugating enzyme [NCBI NR]
  • pir||S52414 ubiquitin-protein ligase (EC 6.3.2.19) UBC9 - yeast (Saccharomyces cerevisiae) [NCBI NR]
  • SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae GN=UBC9 PE=1 SV=1 [Swiss-Prot]
  • UBC9 E2 ubiquitin-conjugating enzyme [mips]
  • SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome (APCC) [SGD]
  • UBC9, Chr IV from 337486-337523,337634-338069 [yeast_orfs2]
  • Chr IV from 337486-337523,337634-338069 [yeastorf3.fasta]
  • (P50623) Ubiquitin-conjugating enzyme E2-18 kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin carrier protein) [4932.FASTACCERV.txt]
  • UBC9 SGDID:S0002222, Chr IV from 337487-337524,337635-338070, Verified ORF [yeastflysequest.fasta]
  • SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome (APCC) [Saccharomyces cerev [nrdb_11152004_Chlamydomonas]
  • UBC9 SGDID:S000002222, Chr IV from 337487-337524,337635-338070, Verified ORF, "SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis m [SGD_S-cerevisiae_na_12-16-2005_con_reversed.fasta]
  • SUMO-conjugating enzyme UBC9 (Ubiquitin-conjugating enzyme E2-18 kDa) (Ubiquitin-protein ligase) (Ubiquitin carrier protein 9) [nr-271106-contam.fasta]
  • ubiquitin-conjugating enzyme [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Chain B, Distinct Functional Domains Of Ubc9 Dictate Cell Survival And Resistance To Genotoxic Stress [nr-271106-contam.fasta]
  • Chain A, Distinct Functional Domains Of Ubc9 Dictate Cell Survival And Resistance To Genotoxic Stress [nr-271106-contam.fasta]
  • SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome (APCC); Ubc9p [Saccharomyce [nr-271106-contam.fasta]
  • ubiquitin-conjugating enzyme [nr-271106-contam.fasta]
  • Chain C, Distinct Functional Domains Of Ubc9 Dictate Cell Survival And Resistance To Genotoxic Stress [nr-271106-contam.fasta]
  • UBC9 [Saccharomyces cerevisiae] [nr-271106-contam.fasta]
  • Chain D, Distinct Functional Domains Of Ubc9 Dictate Cell Survival And Resistance To Genotoxic Stress [nr-271106-contam.fasta]
  • UBC9 SGDID:S000002222, Chr IV from 337487-337524,337635-338070, Verified ORF, "SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome (APCC)" [yeast-bovrabprots.fasta]
  • [chemostatdb.fasta]
  • SUMO-conjugating enzyme UBC9 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=UBC9 PE=1 SV=1 [UniProt_S_cerevisiae_20120516_05-16-2012_reversed.fasta]
  • UBC9 SGDID:S000002222, Chr IV from 337487-337524,337635-338070, Genome Release 64-1-1, Verified ORF, "SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome (APCC)" [yeast-030211-contam.fasta]
  • UBC9 SGDID:S000002222, Chr IV from 337487-337524,337635-338070, Genome Release 64-2-1, Verified ORF, "SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome (APCC)" [20141208_orf_trans.fasta]
  • TR6902|c0_g1_i1|g.4797 ORF TR6902|c0_g1_i1|g.4797 TR6902|c0_g1_i1|m.4797 type:complete len:158 (+) TR6902|c0_g1_i1:54-527(+) [Y12_S_cerevisiae-Sep2015-contam.fasta]
  • TR1597|c0_g1_i1|g.1133 ORF TR1597|c0_g1_i1|g.1133 TR1597|c0_g1_i1|m.1133 type:complete len:158 (+) TR1597|c0_g1_i1:53-526(+) [DBVPG6044_S_cerevisiae-Sep2015-contam.fasta]
  • YDL064W SGDID:S000002222, Chr IV from 337487-337524,337635-338070, Genome Release 64-1-1, Verified ORF, "SUMO-conjugating enzyme involved in the Smt3p conjugation pathway; nuclear protein required for S- and M-phase cyclin degradation and mitotic control; involved in proteolysis mediated by the anaphase-promoting complex cyclosome (APCC)" [2016-01-SGD_Yeast_Contam_Riffle_20140507-Ska-Hec-110-tubulin.fasta]
  • asmbl_453|g.38 ORF asmbl_453|g.38 asmbl_453|m.38 type:complete len:158 (+) asmbl_453:44-517(+) [DBVPG6044_Trinity_v2_2_0_PASA_6May2016-contam.fasta]
  • asmbl_735|g.281 ORF asmbl_735|g.281 asmbl_735|m.281 type:complete len:158 (+) asmbl_735:44-517(+) [Y12_Trinity_v2_2_0_PASA_6May2016-contam.fasta]
  • ID=asmbl_453|g.591 ORF ID=asmbl_453|g.591 ID=asmbl_453|m.591 type:complete len:158 (+) ID=asmbl_453:44-517(+) [DBVPG6044_quiverGenomes_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
  • ID=asmbl_739|g.172 ORF ID=asmbl_739|g.172 ID=asmbl_739|m.172 type:complete len:158 (+) ID=asmbl_739:44-517(+) [Y12_quiver_Trinity_v2_2_0_PASA_2June2016-contam.fasta]
    • Organism: Saccharomyces cerevisiae
    Length: 157 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDALink to PubMed article]
    Biological Process: mitotic spindle elongation [IMPLink to PubMed article]
    G2/M transition of mitotic cell cycle [TASLink to PubMed article]
    protein sumoylation [IDALink to PubMed articleLink to PubMed article][IMPLink to PubMed articleLink to PubMed article][IPILink to PubMed article]
    Molecular Function: nucleotide binding [IEA]
    ubiquitin-protein ligase activity [RCA]
    ATP binding [IEA]
    small conjugating protein ligase activity [IEA]
    ligase activity [IEA]
    SUMO ligase activity [IDA][IMP]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSSLCLQRLQ EERKKWRKDH PFGFYAKPVK KADGSMDLQK WEAGIPGKEG TNWAGGVYPI  60
   61 TVEYPNEYPS KPPKVKFPAG FYHPNVYPSG TICLSILNED QDWRPAITLK QIVLGVQDLL 120
  121 DSPNPNSPAQ EPAWRSFSRN KAEYDKKVLL QAKQYSK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run RPA135 No Comments Schneider, DA, et al. (2006)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen UBC9 UBC9 2 Uetz P, et al. (2000)
    View Screen BEM4 UBC9 2 Unpublished Fields Lab Data
    View Screen SMT3 UBC9 2 Uetz P, et al. (2000)
    View Screen RAD51 UBC9 2 Uetz P, et al. (2000)
    View Screen PRP6 UBC9 2 Uetz P, et al. (2000)
    View Screen NSE5 UBC9 2 Hazbun TR, et al. (2003)

    Microscopy / Localization Data

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      PROTEIN(S) PUBLICATION
    View Data UBC9 Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..157] PSI-BLAST 534.626727 Ubiquitin conjugating enzyme, UBC


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle