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Protein Overview: VBA3

General Information:
Name(s) found: VBA3 / YCL069W [SGD]
Description(s) found:
Found 22 descriptions.
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  • Permease of basic amino acids in the vacuolar membrane [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 458 amino acids

    Gene Ontology:
    Cellular Component: fungal-type vacuole membrane [IDALink to PubMed article]
    Biological Process: epidermal cell fate specification [IDALink to PubMed article][IMPLink to PubMed article]
    basic amino acid transport [IMPLink to PubMed article]
    Molecular Function: basic amino acid transmembrane transporter activity [IDA][IMP]
    transporter activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMLIVGRVV ASVGGSGLQT LCFVIGCTMV GERSRPLVIS ILSCAFAVAA IVGPIIGGAF  60
   61 TTHVTWRWCF YINLPIGGLA IIMFLLTYKA ENKGILQQIK DAIGTISSFT FSKFRHQVNF 120
  121 KRLMNGIIFK FDFFGFALCS AGLVLFLLGL TFGGNKYSWN SGQVIAYLVL GVLLFIFSLV 180
  181 YDFFLFDKFN PEPDNISYRP LLLRRLVAKP AIIIINMVTF LLCTGYNGQM IYSVQFFQLI 240
  241 FASSAWKAGL HLIPIVITNV IAAIASGVIT KKLGLVKPLL IFGGVLGVIG AGLMTLMTNT 300
  301 STKSTQIGVL LLPGFSLGFA LQASLMSAQL QITKDRPEAA MDFIEVTAFN TFMKSLGTTL 360
  361 GGVLSTTVFS ASFHNKVSRA HLEPYEGKTV DDMILYRLQN YDGSHSTIGN ILSDSIKNVF 420
  421 WMDLGFYALG FLFCSFSSNK KLIIPKKDET PEDNLEDK

    Protein Complex Data

      PUBLICATION TOPOLOGY COCOMPLEXED PROTEINS
    View Details Qiu et al. (2008) VBA2 VBA3

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run CEP3 sample cbf3 from feb 2005 Sandall S, et all (2006)
    View Run BOI1 Sample bob1 (2nd set) from october 2005 McCusker D, et al (2007)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..336] MSA 128.793997 View MSA. No confident structure predictions are available.
    2 View Details [337..458] MSA 1.434994 View MSA. No confident structure predictions are available.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle