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Protein Overview: YBR271W

General Information:
Name(s) found: YBR271W [SGD]
Description(s) found:
Found 30 descriptions.
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  • Putative S-adenosylmethionine-dependent methyltransferase of the seven beta-strand family; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; predicted to be involved in ribosome biogenesis [SGD]
    • Organism: Saccharomyces cerevisiae
    Length: 419 amino acids

    Gene Ontology:
    Cellular Component: cytoplasm [IDALink to PubMed article]
    Biological Process: ribosome biogenesis [RCALink to PubMed article]
    Molecular Function: S-adenosylmethionine-dependent methyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFDPLDLYTP DDIQVEALQF NLAEREPKDP CSPQRDEILT AVDEEESDDD DTIIDNLDLP  60
   61 SVKYAPPEVI LCILILLKPD RQVNFNQETG KNKSVLEVCK SHGLEPDLLK RLLTWYTEEW 120
  121 PNKRLNSLEK ICNKIPMLRF TVSKELLLGY YTSVLKKYNN SCGLNEEIIQ ELLKELSSRI 180
  181 SENCGRTAQP SIVRYFELRN LSTSIPLHEP SLTADNLGWK TWGSSLILSQ LVVDHLDYLH 240
  241 TTNVNMLANS DIKQIKVLEL GAGTGLVGLS WALKWKELYG TENIEIFVTD LPEIVTNLKK 300
  301 NVSLNNLGDF VQAEILDWTN PHDFIDKFGH ENEFDVILIA DPIYSPQHPE WVVNMISKFL 360
  361 AASGTCHLEI PLRAKYAKER EVLKLLLKES DLKVVEERHS EGVDDWGAVK YLYRQIVRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    The following runs contain data for this protein:

      BAIT COMMENTS PUBLICATION
    View Run MLP2 #32 Asynchronous Prep-No Phosphopeptide enrichment Keck JM, et al. (2011)

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

      BAIT PREY HITS PUBLICATION
    View Screen MRH1 YBR271W 1 Unpublished Fields Lab Data
    View Screen TAM41 YBR271W 1 Unpublished Fields Lab Data
    View Screen TRL1 YBR271W 1 Unpublished Fields Lab Data
    View Screen ESS1 YBR271W 1 Unpublished Fields Lab Data
    View Screen NOG1 YBR271W 1 Unpublished Fields Lab Data

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

      PROTEIN(S) PUBLICATION
    View Data YBR271W Huh WK, et al. (2003)

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..89] deduced N/A No confident structure predictions are available.
    2 View Details [90..192] MSA 1.240988 View MSA. No confident structure predictions are available.
    3 View Details [193..419] PSI-BLAST 27.39794 Arginine methyltransferase, HMT1

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • transferase activity
    		•  0.569065423404044 bayes_pls_golite062009
  • catalytic activity
    		•  0.486907672100804 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.155495931533276 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.145822362574272 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Malmström L, et al. (2007) Superfamily assignments for the yeast proteome through integration of structure prediction with the gene ontology. PLoS Biol 5(4): e76. doi:10.1371/journal.pbio.0050076


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle