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Protein Overview: gi|56129482, gi|...

General Information:
Name(s) found: gi|56415225 [NCBI NR]
gi|56129482 [NCBI NR]
Description(s) found:
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  • gi|56415225|ref|YP_152300.1| ATP-dependent metalloprotease [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] [NCBI NR]
  • gi|56129482|gb|AAV78988.1| cell division protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] [NCBI NR]
  • cell division protein [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] [nr-271106-contam.fasta]
  • ATP-dependent metalloprotease [Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150] [NCBI-RefSeq_Human_na_04-23-2010_reversed.fasta]
    • Organism: Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150
    Length: 644 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKNLILWLV IAVVLMSVFQ SFGPSESNGR KVDYSTFLQE VNQDQVREAR INGREINVTK  60
   61 KDSNRYTTYI PINDPKLLDN LLTKNVKVVG EPPEEPSLLA SIFISWFPML LLIGVWIFFM 120
  121 RQMQGGGGKG AMSFGKSKAR MLTEDQIKTT FADVAGCDEA KEEVAELVEY LREPSRFQKL 180
  181 GGKIPKGVLM VGPPGTGKTL LAKAIAGEAK VPFFTISGSD FVEMFVGVGA SRVRDMFEQA 240
  241 KKAAPCIIFI DEIDAVGRQR GAGLGGGHDE REQTLNQMLV EMDGFEGNEG IIVIAATNRP 300
  301 DVLDPALLRP GRFDRQVVVG LPDVRGREQI LKVHMRRVPL ATDIDAAIIA RGTPGFSGAD 360
  361 LANLVNEAAL FAARGNKRVV SMVEFEKAKD KIMMGAERRS MVMTEAQKES TAYHEAGHAI 420
  421 IGRLVPEHDP VHKVTIIPRG RALGVTFFLP EGDAISASRQ KLESQISTLY GGRLAEEIIY 480
  481 GVEHVSTGAS NDIKVATNLA RNMVTQWGFS EKLGPLLYAE EEGEVFLGRS VAKAKHMSDE 540
  541 TARIIDQEVK ALIERNYNRA RQILTDNMDI LHAMKDALMK YETIDAPQID DLMARREVRP 600
  601 PAGWEDPNGT NNSDSNGTPQ APRPVDEPRT PNPGNTMSEQ LGDK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..139] PSI-BLAST 68.522879 VCP/p97
    2 View Details [140..644] PSI-BLAST 106.0 EDTA treated

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • hydrolase activity
    		•  4.71605970197038 bayes_pls_golite062009
  • peptidase activity
    		•  3.6994352506738 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  3.52737232558306 bayes_pls_golite062009
  • endopeptidase activity
    		•  3.48761031707503 bayes_pls_golite062009
  • transporter activity
    		•  2.69706219265144 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  2.69246499202248 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.61582393123755 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.59641929642359 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.59333672868803 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.58635717382512 bayes_pls_golite062009
  • motor activity
    		•  2.32425703346903 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  2.3117065785582 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  2.3087157955244 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  2.27169846706667 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  2.26732942861417 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  2.2667183895378 bayes_pls_golite062009
  • microtubule motor activity
    		•  2.26003723459523 bayes_pls_golite062009
  • binding
    		•  2.21604035604783 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  2.18463291739284 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  2.14546190519918 bayes_pls_golite062009
  • ATPase activity
    		•  2.11122403732968 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.59061231802385 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.26476212402779 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.725611289205392 bayes_pls_golite062009
  • nucleotide binding
    		•  0.717697610309727 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.713814218071151 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.713752628021599 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.703036644931229 bayes_pls_golite062009
  • GTPase activity
    		•  0.437665353870877 bayes_pls_golite062009
  • guanyl nucleotide binding
    		•  0.399434758448606 bayes_pls_golite062009
  • GTP binding
    		•  0.398333597279278 bayes_pls_golite062009
  • guanyl ribonucleotide binding
    		•  0.39332178627529 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.294004084202727 bayes_pls_golite062009
  • signal transducer activity
    		•  0.286367085584159 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.286367085584159 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  0.205488803771958 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.192553066860219 bayes_pls_golite062009
  • ATP binding
    		•  0.19169045543599 bayes_pls_golite062009
  • protein transporter activity
    		•  0.178442534411253 bayes_pls_golite062009
  • protein binding
    		•  0.170837278876362 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.165732470448462 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.162060759063149 bayes_pls_golite062009
  • signal recognition particle binding
    		•  0.00643331355694032 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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