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Protein Overview: gi|77553140, gi|...

General Information:
Name(s) found: gi|77553140 [NCBI NR]
gi|115487646 [NCBI NR]
gi|113648817 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|77553140|gb|ABA95936.1| transcriptional regulator, Sir2 family protein, expressed [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|115487646|ref|NP_001066310.1| Os12g0179800 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113648817|dbj|BAF29329.1| Os12g0179800 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 393 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAAGAHASRA SAPIIAGLTG ALRAAYKGFS PQLCNFHASV NNGLLHRRKI QLHFICSFRS  60
   61 IQARYNHSSA VAPKDYCETY IQFLRDKQIV PDSDPPSAKD VDLLYRFIDQ SKKLMVLTGA 120
  121 GMSTESGIPD YRSPNGAYSS GFKPLTHQEF VRSIRARRRY WARSYAGWRR FRRAQPNSAH 180
  181 YALASLERIG RVHSMVTQNV DRLHHRAGSK PVELHGSVYE VACLDCGTSI DRESFQEQVK 240
  241 DLNPKWALAI DSLEVGQPGS DKSFGMQQRP DGDIEIDEKF WEQDFDIPSC NQCGGVLKPD 300
  301 VVMFGDNVPE ERAESTKEAA RNCDALLVVG SALMTMSAFR LARLAHEANA PIAAITIGET 360
  361 RADSILSLKI NARCGEILPR ILQMGSLAVP NVS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..96] deduced N/A No confident structure predictions are available.
    2 View Details [97..393] PSI-BLAST 69.045757 AF0112, Sir2 homolog (Sir2-AF2)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • NAD-dependent protein deacetylase activity
    		•  5.14934829690585 bayes_pls_golite062009
  • NAD-dependent histone deacetylase activity
    		•  5.14934829690585 bayes_pls_golite062009
  • histone deacetylase activity
    		•  4.99253312362199 bayes_pls_golite062009
  • protein deacetylase activity
    		•  4.98469537386457 bayes_pls_golite062009
  • NAD+ ADP-ribosyltransferase activity
    		•  4.62921662347995 bayes_pls_golite062009
  • deacetylase activity
    		•  3.9985462274265 bayes_pls_golite062009
  • transcription regulator activity
    		•  2.9155913558118 bayes_pls_golite062009
  • DNA binding
    		•  2.43141001866996 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.41433477472968 bayes_pls_golite062009
  • transcription repressor activity
    		•  2.24657784428979 bayes_pls_golite062009
  • binding
    		•  2.06552694538163 bayes_pls_golite062009
  • transcription corepressor activity
    		•  1.64212790017753 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  1.38412624618353 bayes_pls_golite062009
  • transcription factor activity
    		•  1.30143289828088 bayes_pls_golite062009
  • transcription factor binding
    		•  1.14766678956419 bayes_pls_golite062009
  • histone binding
    		•  1.08869740692996 bayes_pls_golite062009
  • NAD(P)+-protein-arginine ADP-ribosyltransferase activity
    		•  0.963519974868694 bayes_pls_golite062009
  • catalytic activity
    		•  0.739210399081789 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.62029498163975 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  0.56000396203236 bayes_pls_golite062009
  • transcription cofactor activity
    		•  0.54005617175343 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.52020182886741 bayes_pls_golite062009
  • protein binding
    		•  0.475479132768057 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.47231237137431 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.128843577740998 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0875567934348688 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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