| Protein: | gi|77553140, gi|... |
| Organism: | Oryza sativa Japonica Group |
| Length: | 393 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|77553140, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
344.0 | [0..34] | [391..16] |
|
Region A: Residues: [1-96] |
1 11 21 31 41 51
| | | | | |
1 MAAGAHASRA SAPIIAGLTG ALRAAYKGFS PQLCNFHASV NNGLLHRRKI QLHFICSFRS 60
61 IQARYNHSSA VAPKDYCETY IQFLRDKQIV PDSDPP
|
| Detection Method: |  |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [97-393] |
1 11 21 31 41 51
| | | | | |
1 SAKDVDLLYR FIDQSKKLMV LTGAGMSTES GIPDYRSPNG AYSSGFKPLT HQEFVRSIRA 60
61 RRRYWARSYA GWRRFRRAQP NSAHYALASL ERIGRVHSMV TQNVDRLHHR AGSKPVELHG 120
121 SVYEVACLDC GTSIDRESFQ EQVKDLNPKW ALAIDSLEVG QPGSDKSFGM QQRPDGDIEI 180
181 DEKFWEQDFD IPSCNQCGGV LKPDVVMFGD NVPEERAEST KEAARNCDAL LVVGSALMTM 240
241 SAFRLARLAH EANAPIAAIT IGETRADSIL SLKINARCGE ILPRILQMGS LAVPNVS
|
| Detection Method: | |
| Confidence: | 69.045757 |
| Match: | 1ma3A |
| Description: | AF0112, Sir2 homolog (Sir2-AF2) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| NAD-dependent protein deacetylase activity | 5.14934829690585 | bayes_pls_golite062009 |
| NAD-dependent histone deacetylase activity | 5.14934829690585 | bayes_pls_golite062009 |
| histone deacetylase activity | 4.99253312362199 | bayes_pls_golite062009 |
| protein deacetylase activity | 4.98469537386457 | bayes_pls_golite062009 |
| NAD+ ADP-ribosyltransferase activity | 4.62921662347995 | bayes_pls_golite062009 |
| deacetylase activity | 3.9985462274265 | bayes_pls_golite062009 |
| transcription regulator activity | 2.9155913558118 | bayes_pls_golite062009 |
| DNA binding | 2.43141001866996 | bayes_pls_golite062009 |
| nucleic acid binding | 2.41433477472968 | bayes_pls_golite062009 |
| transcription repressor activity | 2.24657784428979 | bayes_pls_golite062009 |
| binding | 2.06552694538163 | bayes_pls_golite062009 |
| transcription corepressor activity | 1.64212790017753 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.38412624618353 | bayes_pls_golite062009 |
| transcription factor activity | 1.30143289828088 | bayes_pls_golite062009 |
| transcription factor binding | 1.14766678956419 | bayes_pls_golite062009 |
| histone binding | 1.08869740692996 | bayes_pls_golite062009 |
| NAD(P)+-protein-arginine ADP-ribosyltransferase activity | 0.963519974868694 | bayes_pls_golite062009 |
| catalytic activity | 0.739210399081789 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.62029498163975 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.56000396203236 | bayes_pls_golite062009 |
| transcription cofactor activity | 0.54005617175343 | bayes_pls_golite062009 |
| monovalent inorganic cation transmembrane transporter activity | 0.52020182886741 | bayes_pls_golite062009 |
| protein binding | 0.475479132768057 | bayes_pls_golite062009 |
| hydrogen ion transmembrane transporter activity | 0.47231237137431 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 0.128843577740998 | bayes_pls_golite062009 |
| hydrolase activity | 0.0875567934348688 | bayes_pls_golite062009 |
