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Protein Overview: gi|16331081, gi|...

General Information:
Name(s) found: gi|1653574 [NCBI NR]
gi|16331081 [NCBI NR]
Description(s) found:
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  • gi|1653574|dbj|BAA18487.1| negative aliphatic amidase regulator [Synechocystis sp. PCC 6803] [NCBI NR]
  • gi|16331081|ref|NP_441809.1| negative aliphatic amidase regulator [Synechocystis sp. PCC 6803] [NCBI NR]
  • negative aliphatic amidase regulator [Synechocystis sp. PCC 6803]gi|7469489|pir||S76228 hypothetical protein - Synechocystis sp. (strain PCC 6803)gi|1653574|dbj|BAA18487.1| negative aliphatic amidase regulator [Synechocystis sp. PCC 6803] [nrdb_11152004_Chlamydomonas]
  • negative aliphatic amidase regulator [Synechocystis sp. PCC 6803] [nr-271106-contam.fasta]
    • Organism: Synechocystis sp. PCC 6803
    Length: 446 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTNPFGRRKF LLYGSATLGA SLLLKACGGG TEPTTEPTAE PTESPTTGTA PTGEPIKVGL  60
   61 LHSLSGTMAI SETTVVEAAE LAIEEINAAG GVLGRPIEAI KEDGASDWPT FAEKAAKLID 120
  121 QDKVPVVFGC WTSASRKAVL PVFEAKNHML WYPVQYEGQE CSKNIFYTGA APNQQIEPAV 180
  181 DWLLENKGNK FFLVGSDYVF PRTANTIIKE QLKAKGGETL GEDYLPLGNT EVTPIITKIR 240
  241 EALPDGGVIF NTLNGDSNVA FFKQIQAAGL TPDKYPVMSV SVAEEEVRQI GKEYLLGQFA 300
  301 SWNYFQSVDT PANQKFVAAF KAKYGEDRVT NDPMEAAYIS VYLWKAAVEA AGDVGETPEG 360
  361 LEKVRAAAIG KTFDAPEGMV TMQPNHHISK TVRIGEVNDE GQFTIVWSSD GPVDPIPWNQ 420
  421 FVPETKGFTC DWTRTDVENP GKFKAS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..446] PSI-BLAST 54.221849 Amide receptor/negative regulator of the amidase operon (AmiC)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • branched-chain aliphatic amino acid transmembrane transporter activity
    		•  3.7094985892895 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  3.3282400857765 bayes_pls_golite062009
  • carboxylic acid transmembrane transporter activity
    		•  3.32303665976296 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  3.14254368886325 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  3.05849017364472 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  3.05812363262219 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  3.05812363262219 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  3.04729983956777 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  3.03783870537114 bayes_pls_golite062009
  • amino acid binding
    		•  2.9829321098614 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  2.69177924009362 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  2.43201101487102 bayes_pls_golite062009
  • transporter activity
    		•  2.38484762987442 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.17647901857768 bayes_pls_golite062009
  • amine binding
    		•  2.14848643835561 bayes_pls_golite062009
  • ATPase activity
    		•  2.12746564626902 bayes_pls_golite062009
  • binding
    		•  2.08205829478056 bayes_pls_golite062009
  • amino acid transmembrane transporter activity
    		•  1.77461872803738 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.58555411898804 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  1.46159441266612 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.29876905568934 bayes_pls_golite062009
  • hydrolase activity
    		•  1.03156438993666 bayes_pls_golite062009
  • glutamate receptor activity
    		•  0.953525887153408 bayes_pls_golite062009
  • DNA binding
    		•  0.745652072025006 bayes_pls_golite062009
  • transcription factor activity
    		•  0.720083012643756 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.620037783779638 bayes_pls_golite062009
  • receptor activity
    		•  0.428019900700255 bayes_pls_golite062009
  • signal transducer activity
    		•  0.157942702336853 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.157942702336853 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.123126518349198 bayes_pls_golite062009
  • transmembrane receptor activity
    		•  0.0875751493756519 bayes_pls_golite062009
  • protein binding
    		•  0.0869557265373889 bayes_pls_golite062009
  • G-protein coupled receptor activity
    		•  0.0115883143490402 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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