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Protein Overview: gi|30259003, gi|...

General Information:
Name(s) found: gi|30264345 [NCBI NR]
gi|30259003 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|30264345|ref|NP_846722.1| penicillin-binding protein [Bacillus anthracis str. Ames] [NCBI NR]
  • gi|30259003|gb|AAP28208.1| penicillin-binding protein [Bacillus anthracis str. Ames] [NCBI NR]
    • Organism: Bacillus anthracis str. Ames
    Length: 706 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptidoglycan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: penicillin binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKKQKQQKK KTHVPFRLNV LFFCVFLMFS AVIVRLGYVQ IVRGEEYKNE VERKENSTIS  60
   61 NPVPRGKIFD RYGRPVVDNA AVRTITFTKM KGSTAEARLE TAKKLADLIE VPTNKLTDRD 120
  121 KKDYWLAIHK EEAKEKITNK DRQEFKDKKI DDKELDERQR NRVTEEEVNQ LSAKDLEVLA 180
  181 IKSKMDGGYA MTPQVIKKDA TEQEYAIISE NLATLPGVDT NVDWDRKYIY DDLFRSVLGG 240
  241 VSTSDEGLPR ERLDYYLVRD YNRNDRVGKS YLEQQYEDSL HGNKAEVRNV TDKNGNILET 300
  301 INVSKGQSGN NLNLTIDMEL QKRVEEIITK NLLRYKGGQP YLDRAFVVMM NPKNGEVLSM 360
  361 AGKQLVEENG ETKVQDFALG TMTSSYPMGS TVKGATVLTG YQTGAIQPGS VQLDEPIRLK 420
  421 GTPPKSSWKT MGYINDLTAL KMSSNVYMFK TAMNIAGVQY VRGGTLDIPQ KAFDTMRYYF 480
  481 GQFGLGVKTG IDLPNESAGQ TGRGNQPGFL LDLSIGQYDT YTPLQLAQYV STIANGGYRM 540
  541 QPQVVKEIRQ PSAKQDEVGK VVHSMEPKVL NRIDMPESQI KRVQEGFRQV FNDSGGTAAK 600
  601 YFTGAPYKAA GKTGTAQTVY GGDKEIGKKA NGERKETYNL TLVGYAPLED PEVAFSVVVP 660
  661 WVDDKSGING YISRDIMDAY FDLKKVENGE ATKDEIDKKN KEQDDE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..706] PSI-BLAST 89.522879 PBP2x from Streptococcus pneumoniae strain 5259 with reduced susceptibility to beta-lactam antibiotics

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • serine-type D-Ala-D-Ala carboxypeptidase activity
    		•  3.37745387761459 bayes_pls_golite062009
  • penicillin binding
    		•  3.16077730467133 bayes_pls_golite062009
  • serine-type carboxypeptidase activity
    		•  3.02516915958448 bayes_pls_golite062009
  • serine-type exopeptidase activity
    		•  2.98959517344587 bayes_pls_golite062009
  • carboxypeptidase activity
    		•  2.34154596924818 bayes_pls_golite062009
  • catalytic activity
    		•  2.2253600206851 bayes_pls_golite062009
  • drug binding
    		•  2.00354593744547 bayes_pls_golite062009
  • hydrolase activity
    		•  1.60399436620363 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides
    		•  1.50532593223645 bayes_pls_golite062009
  • peptidase activity
    		•  1.19806036181576 bayes_pls_golite062009
  • peptidase activity, acting on L-amino acid peptides
    		•  0.9301046317358 bayes_pls_golite062009
  • serine hydrolase activity
    		•  0.7685205097747 bayes_pls_golite062009
  • serine-type peptidase activity
    		•  0.76747998716775 bayes_pls_golite062009
  • exopeptidase activity
    		•  0.373099549833319 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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