| Protein: | gi|30259003, gi|... |
| Organism: | Bacillus anthracis str. Ames |
| Length: | 706 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|30259003, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
0.0 | [1..706] | [1..706] |
|
|
0.0 | [13..706] | [13..706] |
|
|
0.0 | [1..706] | [1..707] |
|
|
0.0 | [1..706] | [1..708] |
|
|
0.0 | [1..706] | [1..708] |
|
|
0.0 | [28..706] | [1..679] |
|
|
0.0 | [13..687] | [19..694] |
|
|
0.0 | [13..706] | [10..705] |
|
|
0.0 | [13..705] | [15..710] |
|
Region A: Residues: [1-706] |
1 11 21 31 41 51
| | | | | |
1 MSKKQKQQKK KTHVPFRLNV LFFCVFLMFS AVIVRLGYVQ IVRGEEYKNE VERKENSTIS 60
61 NPVPRGKIFD RYGRPVVDNA AVRTITFTKM KGSTAEARLE TAKKLADLIE VPTNKLTDRD 120
121 KKDYWLAIHK EEAKEKITNK DRQEFKDKKI DDKELDERQR NRVTEEEVNQ LSAKDLEVLA 180
181 IKSKMDGGYA MTPQVIKKDA TEQEYAIISE NLATLPGVDT NVDWDRKYIY DDLFRSVLGG 240
241 VSTSDEGLPR ERLDYYLVRD YNRNDRVGKS YLEQQYEDSL HGNKAEVRNV TDKNGNILET 300
301 INVSKGQSGN NLNLTIDMEL QKRVEEIITK NLLRYKGGQP YLDRAFVVMM NPKNGEVLSM 360
361 AGKQLVEENG ETKVQDFALG TMTSSYPMGS TVKGATVLTG YQTGAIQPGS VQLDEPIRLK 420
421 GTPPKSSWKT MGYINDLTAL KMSSNVYMFK TAMNIAGVQY VRGGTLDIPQ KAFDTMRYYF 480
481 GQFGLGVKTG IDLPNESAGQ TGRGNQPGFL LDLSIGQYDT YTPLQLAQYV STIANGGYRM 540
541 QPQVVKEIRQ PSAKQDEVGK VVHSMEPKVL NRIDMPESQI KRVQEGFRQV FNDSGGTAAK 600
601 YFTGAPYKAA GKTGTAQTVY GGDKEIGKKA NGERKETYNL TLVGYAPLED PEVAFSVVVP 660
661 WVDDKSGING YISRDIMDAY FDLKKVENGE ATKDEIDKKN KEQDDE
|
| Detection Method: |  |
| Confidence: | 89.522879 |
| Match: | 1rp5A |
| Description: | PBP2x from Streptococcus pneumoniae strain 5259 with reduced susceptibility to beta-lactam antibiotics |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| serine-type D-Ala-D-Ala carboxypeptidase activity | 3.37745387761459 | bayes_pls_golite062009 |
| penicillin binding | 3.16077730467133 | bayes_pls_golite062009 |
| serine-type carboxypeptidase activity | 3.02516915958448 | bayes_pls_golite062009 |
| serine-type exopeptidase activity | 2.98959517344587 | bayes_pls_golite062009 |
| carboxypeptidase activity | 2.34154596924818 | bayes_pls_golite062009 |
| catalytic activity | 2.2253600206851 | bayes_pls_golite062009 |
| drug binding | 2.00354593744547 | bayes_pls_golite062009 |
| hydrolase activity | 1.60399436620363 | bayes_pls_golite062009 |
| hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides | 1.50532593223645 | bayes_pls_golite062009 |
| peptidase activity | 1.19806036181576 | bayes_pls_golite062009 |
| peptidase activity, acting on L-amino acid peptides | 0.9301046317358 | bayes_pls_golite062009 |
| serine hydrolase activity | 0.7685205097747 | bayes_pls_golite062009 |
| serine-type peptidase activity | 0.76747998716775 | bayes_pls_golite062009 |
| exopeptidase activity | 0.373099549833319 | bayes_pls_golite062009 |
