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Protein Overview: gi|24348233, gi|...

General Information:
Name(s) found: gi|24373832 [NCBI NR]
gi|24348233 [NCBI NR]
Description(s) found:
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  • gi|24373832|ref|NP_717875.1| acetolactate synthase 3 catalytic subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348233|gb|AAN55319.1|AE015669_7 acetolactate synthase III, large subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • acetolactate synthase III, large subunit [Shewanella oneidensis MR-1]gi|24348233|gb|AAN55319.1| acetolactate synthase III, large subunit [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • acetolactate synthase III, large subunit [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
  • acetolactate synthase III large subunit [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 572 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: isoleucine biosynthetic process [ISSLink to PubMed article]
    valine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: acetolactate synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEKLSGASMI VRSLIDEGVK HIFGYPGGSV LDIYDALHLI PGIEHILVRH EQAAVHMADG  60
   61 YARATGKVGV VLVTSGPGAT NAITGIATAY MDSIPLVVLS GQVPSNLIGN DAFQECDMIG 120
  121 ISRPVVKHSF LVQDPTQIPE IIKKAFYIAS TGRPGPVVVD LPKDCLNPAL LHDYIYPESI 180
  181 KMRSYNPTTS GHKGQIRRGL QALLAAKKPV LYVGGGAIIS GSEKQILTLA EKLNIPVIST 240
  241 LMGLGAFPGT HKNSLGMLGM HGRYEANMAM HNCDLIFGIG VRFDDRTTNN IEKYCPNATI 300
  301 LHIDIDPSSI SKTVRVDIPI VGSADIVLDS ILALLDEASE TNDFVAINQW WQEITTWRNR 360
  361 QCLAYDKESN RIKPQQVIET LYKLTNGEAY VASDVGQHQM FAALYYPFDK PRRWINSGGL 420
  421 GTMGFGLPAA MGVKMAMPDE TVVCVTGDGS IQMNIQELST ALQYDTPVKI INLNNRFLGM 480
  481 VKQWQDMIYS GRHSHSYMDS VPNFAKIAEA YGHVGMTISD PAELESKMAE ALAMKDRLVF 540
  541 IDIMVDETEH VYPMLIRGGA MNEMWLSKTE KC

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..572] PSI-BLAST 144.0 Crystal structure of Arabidopsis thaliana Acetohydroxyacid synthase In Complex With A Sulfonylurea Herbicide Chlorimuron Ethyl

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • acetolactate synthase activity
    		•  12.903449876837 bayes_pls_golite062009
  • transferase activity, transferring aldehyde or ketonic groups
    		•  12.3239025230705 bayes_pls_golite062009
  • pyruvate dehydrogenase activity
    		•  5.28857071459273 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor
    		•  5.21233670052586 bayes_pls_golite062009
  • pyruvate dehydrogenase (acetyl-transferring) activity
    		•  5.08663245333808 bayes_pls_golite062009
  • transketolase activity
    		•  2.50501741089295 bayes_pls_golite062009
  • catalytic activity
    		•  2.25537597692103 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  2.15444163802756 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  1.98546381612935 bayes_pls_golite062009
  • thiamin pyrophosphate binding
    		•  1.87247313698582 bayes_pls_golite062009
  • oxidoreductase activity
    		•  1.85833680148029 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  1.82969293063325 bayes_pls_golite062009
  • 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) activity
    		•  1.65348126142808 bayes_pls_golite062009
  • deoxyhypusine synthase activity
    		•  1.46517585302326 bayes_pls_golite062009
  • alpha-ketoacid dehydrogenase activity
    		•  1.20517690263403 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.0611726850452 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  0.982646671777 bayes_pls_golite062009
  • binding
    		•  0.980920092099572 bayes_pls_golite062009
  • histone deacetylase activity
    		•  0.9493052849746 bayes_pls_golite062009
  • protein deacetylase activity
    		•  0.942714095508542 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.872247149132548 bayes_pls_golite062009
  • NAD-dependent histone deacetylase activity
    		•  0.86895852396873 bayes_pls_golite062009
  • NAD-dependent protein deacetylase activity
    		•  0.86895852396873 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.78591260444574 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.625412573920025 bayes_pls_golite062009
  • DNA binding
    		•  0.56819169389651 bayes_pls_golite062009
  • hydrolase activity
    		•  0.536729211484905 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.51426028502998 bayes_pls_golite062009
  • transferase activity
    		•  0.413024577830522 bayes_pls_golite062009
  • deacetylase activity
    		•  0.34210759801484 bayes_pls_golite062009
  • pyruvate decarboxylase activity
    		•  0.198062360371269 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.114062221123972 bayes_pls_golite062009
  • transcription factor binding
    		•  0.0144694403853303 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle