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Protein Overview: gi|24373368, gi|...

General Information:
Name(s) found: gi|24373368 [NCBI NR]
gi|24347631 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24373368|ref|NP_717411.1| peptide ABC transporter, permease protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347631|gb|AAN54855.1|AE015624_8 peptide ABC transporter, permease protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 296 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: peptide transport [ISSLink to PubMed article]
    Molecular Function: ATPase activity, coupled to transmembrane movement of substances [ISSLink to PubMed article]
    peptide transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPPVKIYQED QIASPMMRVW QNFSANPFAL AGLWTIAFLL LLTLFGPLIA PFAPEAQDPR  60
   61 ALLLPPSWDP SGTVSHFLGT DDLGRDIFSR LLHGAHLTFG MALMIVGTAL FTGFIIGSLS 120
  121 GMMRGLKSSI LGHLLDALLS IPSLLMAILV VAVMGPGLEN VFWAVGIALT PQFVRSIHQS 180
  181 VHEELQKEYV TAARLDGANS IQIFWYVIMP NVWEVVIIQT TLAISAAILD IAALGFLSLG 240
  241 AQAPSPEWGA MVAQGMDNLL TAPWTVTIPG LAILFSVLAI NLVGDGLRSA LAPIRN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..84] deduced N/A No confident structure predictions are available.
    2 View Details [85..296] PSI-BLAST 8.69897 No description for 2onkC was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • ATPase activity, coupled to transmembrane movement of substances
    		•  7.98776119907207 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  7.98726234902655 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  7.98726234902655 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  7.97287417765536 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  7.96249144456164 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  7.8678894318504 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  7.29227234008448 bayes_pls_golite062009
  • ATPase activity
    		•  6.94069583578738 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  6.59903874016214 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  6.52169210550643 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  6.50067149801529 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  6.5003333073452 bayes_pls_golite062009
  • hydrolase activity
    		•  4.78607811092587 bayes_pls_golite062009
  • transporter activity
    		•  4.47791794099048 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.39634414867723 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.91409799494188 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.86345398417242 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.70116960945763 bayes_pls_golite062009
  • sugar transmembrane transporter activity
    		•  2.67115360425434 bayes_pls_golite062009
  • maltose-transporting ATPase activity
    		•  2.14010989459818 bayes_pls_golite062009
  • oligosaccharide-transporting ATPase activity
    		•  2.14010989459818 bayes_pls_golite062009
  • oligosaccharide transmembrane transporter activity
    		•  2.14010989459818 bayes_pls_golite062009
  • disaccharide transmembrane transporter activity
    		•  2.09224118357857 bayes_pls_golite062009
  • alpha-glucoside transmembrane transporter activity
    		•  2.09224118357857 bayes_pls_golite062009
  • maltose transmembrane transporter activity
    		•  2.09224118357857 bayes_pls_golite062009
  • glucoside transmembrane transporter activity
    		•  2.04706530621258 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.82526327874202 bayes_pls_golite062009
  • anion transmembrane-transporting ATPase activity
    		•  1.56112505527856 bayes_pls_golite062009
  • sulfate transmembrane-transporting ATPase activity
    		•  1.00737155315764 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  0.96228415837358 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of ions
    		•  0.69074662322395 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.483541714040201 bayes_pls_golite062009
  • symporter activity
    		•  0.483541714040201 bayes_pls_golite062009
  • catalytic activity
    		•  0.427775057748038 bayes_pls_golite062009
  • anion transmembrane transporter activity
    		•  0.38505555521505 bayes_pls_golite062009
  • inorganic anion transmembrane transporter activity
    		•  0.171737154712589 bayes_pls_golite062009
  • maltooligosaccharide-importing ATPase activity
    		•  0.16532450344344 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  0.14639856424105 bayes_pls_golite062009
  • carbohydrate transmembrane transporter activity
    		•  0.0202682073710961 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle