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Protein Overview: gi|21689703, gi|...

General Information:
Name(s) found: gi|21689703 [NCBI NR]
gi|17529152 [NCBI NR]
gi|15219722 [NCBI NR]
Description(s) found:
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  • gi|21689703|gb|AAM67473.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|17529152|gb|AAL38802.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15219722|ref|NP_171937.1| aldo/keto reductase family protein [Arabidopsis thaliana] [NCBI NR]
  • unknown protein [Arabidopsis thaliana]gi|17529152|gb|AAL38802.1| unknown protein [Arabidopsis thaliana]gi|15219722|ref|NP_171937.1| aldo/keto reductase family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Aldo/keto reductase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | aldo/keto reductase family protein | chr1:1191633-1193698 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • aldo-keto reductase/ oxidoreductase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | NAD(P)-linked oxidoreductase superfamily protein | chr1:1191634-1193699 FORWARD LENGTH=412 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • NAD(P)-linked oxidoreductase-like protein OS=Arabidopsis thaliana GN=At1g04420 PE=2 SV=1 [ARATH-contam.fasta]
  • NAD(P)-linked oxidoreductase superfamily protein OS=Arabidopsis thaliana GN=At1g04420 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 412 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    chloroplast envelope [IDA]
    Biological Process: oxidation reduction [IEA]
    Molecular Function: oxidoreductase activity [IEA]
    aldo-keto reductase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSYVTYST VTPVVSSSNI RGVFRLAFTR RRVTLSPNAR RRILRVSAKA STKNAMEYRK  60
   61 LGDSDLNISE VTMGTMTFGE QNTEKESHEM LSYAIEEGIN CIDTAEAYPI PMKKETQGKT 120
  121 DLYISSWLKS QQRDKIVLAT KVCGYSERSA YIRDSGEILR VDAANIKESV EKSLKRLGTD 180
  181 YIDLLQIHWP DRYVPLFGDF YYETSKWRPS VPFAEQLRAF QDLIVEGKVR YIGVSNETSY 240
  241 GVTEFVNTAK LEGLPKIVSI QNGYSLLVRC RYEVDLVEVC HPKNCNVGLL AYSPLGGGSL 300
  301 SGKYLATDQE ATKNARLNLF PGYMERYKGS LAKEATIQYV EVAKKYGLTP VELALGFVRD 360
  361 RPFVTSTIIG ATSVKQLKED IDAFLMTERP FSQEVMADID AVFKRFKDPS FV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..412] PSI-BLAST 87.39794 Tas protein

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • potassium channel activity
    		•  7.51963276589303 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  7.40239094355354 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  6.67507110634301 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  6.588881463055 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  6.52286930358188 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  6.50716590143831 bayes_pls_golite062009
  • cation channel activity
    		•  5.72172645555113 bayes_pls_golite062009
  • ion channel activity
    		•  5.15119282480682 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  5.07214658557001 bayes_pls_golite062009
  • channel activity
    		•  5.07214658557001 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  5.02503292701043 bayes_pls_golite062009
  • gated channel activity
    		•  4.92848832197692 bayes_pls_golite062009
  • oxidoreductase activity
    		•  3.33866876957213 bayes_pls_golite062009
  • pyridoxine 4-dehydrogenase activity
    		•  3.25535446462297 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  2.72342789448248 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.63772951680109 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  2.62743427046359 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.58068601897668 bayes_pls_golite062009
  • aldo-keto reductase activity
    		•  2.57303336304449 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.46488926936937 bayes_pls_golite062009
  • catalytic activity
    		•  1.68179794468736 bayes_pls_golite062009
  • transporter activity
    		•  1.24767072239634 bayes_pls_golite062009
  • aldehyde reductase activity
    		•  1.16639404121425 bayes_pls_golite062009
  • binding
    		•  1.15657176144267 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  1.03420335553507 bayes_pls_golite062009
  • potassium channel regulator activity
    		•  1.03017249802223 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.783004917746429 bayes_pls_golite062009
  • protein binding
    		•  0.220529867719707 bayes_pls_golite062009
  • 3-alpha-hydroxysteroid dehydrogenase (B-specific) activity
    		•  0.207008954325429 bayes_pls_golite062009
  • trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity
    		•  0.207008954325429 bayes_pls_golite062009
    		• 0.139676323362391 bayes_pls_golite062009
  • channel regulator activity
    		•  0.12154513851913 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle