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Protein Overview: gi|215701397, gi...

General Information:
Name(s) found: gi|51090928 [NCBI NR]
gi|215701397 [NCBI NR]
gi|215687253 [NCBI NR]
gi|115468838 [NCBI NR]
gi|113596058 [NCBI NR]
Description(s) found:
Found 7 descriptions.
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  • gi|51090928|dbj|BAD35532.1| putative small calcium-binding mitochondrial carrier 2 [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215701397|dbj|BAG92821.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|215687253|dbj|BAG91818.1| unnamed protein product [Oryza sativa Japonica Group] [NCBI NR]
  • gi|115468838|ref|NP_001058018.1| Os06g0604500 [Oryza sativa (japonica cultivar-group)] [NCBI NR]
  • gi|113596058|dbj|BAF19932.1| Os06g0604500 [Oryza sativa Japonica Group] [NCBI NR]
    • Organism: Oryza sativa Japonica Group
    Length: 515 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGAAVHAVD PRGGASPPPV AKAEAATAAA AAAGGCEPAR KAGAVTMEHV LLALHETEAE  60
   61 REARIREMFA FFDVDGRGQL DYAQIEAGLA ALQIPAECKY ARELLRACDR DRDGRVGYDD 120
  121 FRRYMDDKEL ELYRIFQAID VEHNGCILPE ELWDALVKAG IEIDDEELAR FVEHVDKDNN 180
  181 GIITFEEWRD FLLLYPNEVT IENIYHHWER VCLVDIGEQA VIPEGISKSV NASKYLIAGG 240
  241 IAGAASRTAT APLDRLKVIM QVQTTRTTVM HSIKDIWSQG GMLAFFRGNG LNVVKVAPES 300
  301 AIRFYAYEML KEYIMKSKGE NKSEVGPSER LVAGGLAGAV AQTAIYPVDL VKTRLQTYSC 360
  361 VDGKVPSLGA LSRDILMHEG PRAFYRGLVP SLLGIVPYAG IDLAVYETLK DVSKTYILKD 420
  421 SDPGPLVQLG CGTVSGALGA TCVYPLQVIR TRLQAQRANS ESAYRGMSDV FWRTLQHEGV 480
  481 SGFYKGILPN LLKVVPAASI TYLVYEAMKK NLSLD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..140] PSI-BLAST 41.0 CALMODULIN MUTANT WITH A TWO RESIDUE DELETION IN THE CENTRAL HELIX
    2 View Details [141..227] FFAS03 3.62 Calmodulin
    3 View Details [228..515] PSI-BLAST 72.221849 structure of mitochondrial ADP/ATP carrier in complex with carboxyatractyloside

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  3.17556402087346 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.61874575467092 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.59226289545114 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.57032504567157 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.55650624542181 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.37465721152046 bayes_pls_golite062009
  • structural molecule activity
    		•  2.02132683356917 bayes_pls_golite062009
  • potassium channel activity
    		•  1.89948827776974 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.82714164083189 bayes_pls_golite062009
  • motor activity
    		•  1.81368053536929 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  1.81135503818602 bayes_pls_golite062009
  • structural constituent of muscle
    		•  1.59541980494825 bayes_pls_golite062009
  • actin binding
    		•  1.50831300191117 bayes_pls_golite062009
  • cation channel activity
    		•  1.49312394054212 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.43263098461462 bayes_pls_golite062009
  • calcium ion binding
    		•  1.40919295397643 bayes_pls_golite062009
  • DNA binding
    		•  1.40714762620388 bayes_pls_golite062009
  • ion binding
    		•  1.36376383271837 bayes_pls_golite062009
  • metal ion binding
    		•  1.34827363853601 bayes_pls_golite062009
  • cation binding
    		•  1.34827363853601 bayes_pls_golite062009
  • protein binding
    		•  1.16246005294206 bayes_pls_golite062009
  • transporter activity
    		•  1.15928534291452 bayes_pls_golite062009
  • microfilament motor activity
    		•  1.0725773039399 bayes_pls_golite062009
  • channel activity
    		•  1.05847414989139 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  1.05847414989139 bayes_pls_golite062009
  • ion channel activity
    		•  1.0369591011376 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  1.03529144716694 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  0.986621437232479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.945691505472547 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  0.910148857310729 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  0.896351900356978 bayes_pls_golite062009
  • gated channel activity
    		•  0.855502499003241 bayes_pls_golite062009
  • tubulin binding
    		•  0.851404549871251 bayes_pls_golite062009
  • actin-dependent ATPase activity
    		•  0.83859958498483 bayes_pls_golite062009
  • signal transducer activity
    		•  0.719137471869026 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.719137471869026 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  0.717054504236607 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.693724160233023 bayes_pls_golite062009
  • microtubule binding
    		•  0.482216984478791 bayes_pls_golite062009
  • kinase activity
    		•  0.441286902559639 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.441121492437569 bayes_pls_golite062009
  • myosin binding
    		•  0.41761909113528 bayes_pls_golite062009
    		• 0.34446792626966 bayes_pls_golite062009
  • channel regulator activity
    		•  0.32809521759917 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.314221577186574 bayes_pls_golite062009
  • protein complex binding
    		•  0.278602833762221 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.246383459363256 bayes_pls_golite062009
  • G-protein beta/gamma-subunit binding
    		•  0.13723868253862 bayes_pls_golite062009
  • actin filament binding
    		•  0.0239092123185181 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  3.05873877511752 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  2.62465453278501 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.58331384033974 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  2.56450760908401 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.46558208549358 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  2.39219065596758 bayes_pls_golite062009
  • structural molecule activity
    		•  1.98487959981447 bayes_pls_golite062009
  • potassium channel activity
    		•  1.89216151100151 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.84460540487811 bayes_pls_golite062009
  • voltage-gated potassium channel activity
    		•  1.80063823023387 bayes_pls_golite062009
  • motor activity
    		•  1.68044193245645 bayes_pls_golite062009
  • cation channel activity
    		•  1.4950665324992 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.47235952681162 bayes_pls_golite062009
  • DNA binding
    		•  1.43776232616174 bayes_pls_golite062009
  • actin binding
    		•  1.42596573582079 bayes_pls_golite062009
  • structural constituent of muscle
    		•  1.29684268545673 bayes_pls_golite062009
  • transporter activity
    		•  1.18173318787461 bayes_pls_golite062009
  • protein binding
    		•  1.09433047543741 bayes_pls_golite062009
  • channel activity
    		•  1.06257290148275 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  1.06257290148275 bayes_pls_golite062009
  • ion channel activity
    		•  1.04002358216664 bayes_pls_golite062009
  • ion binding
    		•  1.03987367434642 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  1.03912277255945 bayes_pls_golite062009
  • cation binding
    		•  1.02345340724535 bayes_pls_golite062009
  • metal ion binding
    		•  1.02345340724535 bayes_pls_golite062009
  • voltage-gated cation channel activity
    		•  0.978447945241838 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.967232199555998 bayes_pls_golite062009
  • calcium ion binding
    		•  0.96333115642547 bayes_pls_golite062009
  • voltage-gated ion channel activity
    		•  0.903772926548548 bayes_pls_golite062009
  • microfilament motor activity
    		•  0.896570410571443 bayes_pls_golite062009
  • voltage-gated channel activity
    		•  0.890153400390069 bayes_pls_golite062009
  • gated channel activity
    		•  0.857277240351281 bayes_pls_golite062009
  • tubulin binding
    		•  0.812194607648073 bayes_pls_golite062009
  • signal transducer activity
    		•  0.728474440447239 bayes_pls_golite062009
  • molecular transducer activity
    		•  0.728474440447239 bayes_pls_golite062009
  • amine transmembrane transporter activity
    		•  0.718077220370247 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.713088884599039 bayes_pls_golite062009
  • actin-dependent ATPase activity
    		•  0.633699364706973 bayes_pls_golite062009
  • kinase activity
    		•  0.469615995845179 bayes_pls_golite062009
  • phosphotransferase activity, alcohol group as acceptor
    		•  0.466822909047339 bayes_pls_golite062009
  • microtubule binding
    		•  0.459835151828266 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.346077079684229 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.255162242356474 bayes_pls_golite062009
  • protein complex binding
    		•  0.229066577003238 bayes_pls_golite062009
    		• 0.184502455796377 bayes_pls_golite062009
  • myosin binding
    		•  0.180486266101886 bayes_pls_golite062009
  • channel regulator activity
    		•  0.165732133218208 bayes_pls_golite062009
  • transferase activity
    		•  0.0241351960434347 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.014511553141427 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.68

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle