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Protein Overview: gi|18414189, gi|...

General Information:
Name(s) found: gi|18414189 [NCBI NR]
gi|16973453 [NCBI NR]
gi|16973451 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|18414189|ref|NP_567426.1| phragmoplast-associated kinesin-related protein 2 (PAKRP2) [Arabidopsis thaliana] [NCBI NR]
  • gi|16973453|gb|AAL32294.1|AF320249_1 phragmoplast-associated kinesin-related protein 2 [Arabidopsis thaliana] [NCBI NR]
  • gi|16973451|gb|AAL32293.1|AF320248_1 phragmoplast-associated kinesin-related protein 2 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 869 amino acids

    Gene Ontology:
    Cellular Component: phragmoplast [IDA]
    Biological Process: microtubule-based movement [IEA]
    Molecular Function: ATP binding [IEA]
    microtubule motor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPTPSSSRS NQTQYTLIRT PQTKQRLNFH SKTPNPDGSK DPSPPEHPVE VIGRIRDYPD  60
   61 RKEKSPSILQ VNTDNQTVRV RADVGYRDFT LDGVSFSEQE GLEEFYKKFI EERIKGVKVG 120
  121 NKCTIMMYGP TGAGKSHTMF GCGKEPGIVY RSLRDILGDS DQDGVTFVQV TVLEVYNEEI 180
  181 YDLLSTNSSN NLGIGWPKGA STKVRLEVMG KKAKNASFIS GTEAGKISKE IVKVEKRRIV 240
  241 KSTLCNERSS RSHCIIILDV PTVGGRLMLV DMAGSENIDQ AGQTGFEAKM QTAKINQGNI 300
  301 ALKRVVESIA NGDSHVPFRD SKLTMLLQDS FEDDKSKILM ILCASPDPKE MHKTLCTLEY 360
  361 GAKAKCIVRG SHTPNKDKYG GDESASAVIL GSRIAAMDEF IIKLQSEKKQ KEKERNEAQK 420
  421 QLKKKEEEVA ALRSLLTQRE ACATNEEEIK EKVNERTQLL KSELDKKLEE CRRMAEEFVE 480
  481 MERRRMEERI VQQQEELEMM RRRLEEIEVE FRRSNGGSVD ETSGFAKRLR SLYSDDDPGM 540
  541 VKSMDLDMGD PEPVKQVWGA VSHQSSNTIS SNFTNLLQPK PSENMLTQMY PDRVCLSTVF 600
  601 EEEEVEEEEE KVIVEDKSIC LITTPMPSLN SEGLGKENCF NGADDKESAS SRRLRIQNIF 660
  661 TLCGNQRELS QHSGQEEDQA NIASPDKKDN QFFSITNKAE ALAVEEAKEN NISVDQRENG 720
  721 QLDIYVKWET AADNPRKLIT TLRVTKDATL ADLRKLIEIY LGSDNQAFTF LKLGEPCGAQ 780
  781 VAKEKESTVQ ATSLPLCNGH AYLATLRPGK SSQHKSLQPA SPLPLNPIEN MMEVTPISKV 840
  841 TPNHQVDEFS SPNLVAHLSS TPFITLRRH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..388] PSI-BLAST 72.154902 Kinesin
    2 View Details [389..470] deduced N/A No confident structure predictions are available.
    3 View Details [471..869] PSI-BLAST 10.221849 Heavy meromyosin subfragment

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • microtubule motor activity
    		•  6.13591371239337 bayes_pls_golite062009
  • motor activity
    		•  4.04927796049806 bayes_pls_golite062009
  • plus-end-directed microtubule motor activity
    		•  3.73660510185685 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  2.95079405147356 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  2.87427509025394 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  2.85499564954033 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  2.85178667290149 bayes_pls_golite062009
  • tubulin binding
    		•  2.67743463093593 bayes_pls_golite062009
  • binding
    		•  2.64537357529343 bayes_pls_golite062009
  • microtubule binding
    		•  2.59155206524122 bayes_pls_golite062009
  • transporter activity
    		•  2.58140740499725 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  2.4101693596493 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  2.39695871109024 bayes_pls_golite062009
  • ATPase activity
    		•  2.39535714892224 bayes_pls_golite062009
  • ATPase activity, coupled
    		•  2.18396165590908 bayes_pls_golite062009
  • actin binding
    		•  1.75397031486306 bayes_pls_golite062009
  • hydrolase activity
    		•  1.57549510726226 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.29730375126024 bayes_pls_golite062009
  • protein binding
    		•  1.22129154759482 bayes_pls_golite062009
  • ATP-dependent DNA helicase activity
    		•  0.95653374522847 bayes_pls_golite062009
  • purine nucleotide binding
    		•  0.929901285538132 bayes_pls_golite062009
  • nucleotide binding
    		•  0.922442819194247 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  0.920987930180051 bayes_pls_golite062009
  • ribonucleotide binding
    		•  0.920926158369519 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.906554174337376 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.777787753097919 bayes_pls_golite062009
  • GTPase activity
    		•  0.768815888267067 bayes_pls_golite062009
  • actin filament binding
    		•  0.728264616959762 bayes_pls_golite062009
  • microtubule plus-end binding
    		•  0.673980113049624 bayes_pls_golite062009
  • DNA binding
    		•  0.479412476059825 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.434775387083003 bayes_pls_golite062009
  • microfilament motor activity
    		•  0.415173945174069 bayes_pls_golite062009
  • ATP binding
    		•  0.41092997612902 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.385813421701492 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.377870145186619 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  0.355466224802969 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.312171320541728 bayes_pls_golite062009
  • primary active transmembrane transporter activity
    		•  0.294474570607914 bayes_pls_golite062009
  • P-P-bond-hydrolysis-driven transmembrane transporter activity
    		•  0.282352478532746 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances
    		•  0.220608508617331 bayes_pls_golite062009
  • ATPase activity, coupled to transmembrane movement of substances
    		•  0.219533217661421 bayes_pls_golite062009
  • ATPase activity, coupled to movement of substances
    		•  0.219157471322311 bayes_pls_golite062009
  • minus-end-directed microtubule motor activity
    		•  0.068779631341469 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  0.0254369227200564 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  0.0111338193708552 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle