| Protein: | gi|18414189, gi|... |
| Organism: | Arabidopsis thaliana |
| Length: | 869 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|18414189, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
291.0 | [0..1] | [770..215] |
|
Region A: Residues: [1-388] |
1 11 21 31 41 51
| | | | | |
1 MAPTPSSSRS NQTQYTLIRT PQTKQRLNFH SKTPNPDGSK DPSPPEHPVE VIGRIRDYPD 60
61 RKEKSPSILQ VNTDNQTVRV RADVGYRDFT LDGVSFSEQE GLEEFYKKFI EERIKGVKVG 120
121 NKCTIMMYGP TGAGKSHTMF GCGKEPGIVY RSLRDILGDS DQDGVTFVQV TVLEVYNEEI 180
181 YDLLSTNSSN NLGIGWPKGA STKVRLEVMG KKAKNASFIS GTEAGKISKE IVKVEKRRIV 240
241 KSTLCNERSS RSHCIIILDV PTVGGRLMLV DMAGSENIDQ AGQTGFEAKM QTAKINQGNI 300
301 ALKRVVESIA NGDSHVPFRD SKLTMLLQDS FEDDKSKILM ILCASPDPKE MHKTLCTLEY 360
361 GAKAKCIVRG SHTPNKDKYG GDESASAV
|
| Detection Method: |  |
| Confidence: | 72.154902 |
| Match: | 1gojA |
| Description: | Kinesin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| microtubule motor activity | 6.13591371239337 | bayes_pls_golite062009 |
| motor activity | 4.04927796049806 | bayes_pls_golite062009 |
| plus-end-directed microtubule motor activity | 3.73660510185685 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 2.95079405147356 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.87427509025394 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 2.85499564954033 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 2.85178667290149 | bayes_pls_golite062009 |
| tubulin binding | 2.67743463093593 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| microtubule binding | 2.59155206524122 | bayes_pls_golite062009 |
| transporter activity | 2.58140740499725 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.4101693596493 | bayes_pls_golite062009 |
| transmembrane transporter activity | 2.39695871109024 | bayes_pls_golite062009 |
| ATPase activity | 2.39535714892224 | bayes_pls_golite062009 |
| ATPase activity, coupled | 2.18396165590908 | bayes_pls_golite062009 |
| actin binding | 1.75397031486306 | bayes_pls_golite062009 |
| hydrolase activity | 1.57549510726226 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 1.29730375126024 | bayes_pls_golite062009 |
| protein binding | 1.22129154759482 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 0.95653374522847 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.929901285538132 | bayes_pls_golite062009 |
| nucleotide binding | 0.922442819194247 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.920987930180051 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.920926158369519 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 0.906554174337376 | bayes_pls_golite062009 |
| nucleic acid binding | 0.777787753097919 | bayes_pls_golite062009 |
| GTPase activity | 0.768815888267067 | bayes_pls_golite062009 |
| actin filament binding | 0.728264616959762 | bayes_pls_golite062009 |
| microtubule plus-end binding | 0.673980113049624 | bayes_pls_golite062009 |
| DNA binding | 0.479412476059825 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.434775387083003 | bayes_pls_golite062009 |
| microfilament motor activity | 0.415173945174069 | bayes_pls_golite062009 |
| ATP binding | 0.41092997612902 | bayes_pls_golite062009 |
| adenyl ribonucleotide binding | 0.385813421701492 | bayes_pls_golite062009 |
| adenyl nucleotide binding | 0.377870145186619 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.355466224802969 | bayes_pls_golite062009 |
| transcription regulator activity | 0.312171320541728 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.294474570607914 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.282352478532746 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.220608508617331 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.219533217661421 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.219157471322311 | bayes_pls_golite062009 |
| minus-end-directed microtubule motor activity | 0.068779631341469 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0254369227200564 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 0.0111338193708552 | bayes_pls_golite062009 |
|
Region A: Residues: [389-470] |
1 11 21 31 41 51
| | | | | |
1 ILGSRIAAMD EFIIKLQSEK KQKEKERNEA QKQLKKKEEE VAALRSLLTQ REACATNEEE 60
61 IKEKVNERTQ LLKSELDKKL EE
|
| Detection Method: | |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
|
Region A: Residues: [471-869] |
1 11 21 31 41 51
| | | | | |
1 CRRMAEEFVE MERRRMEERI VQQQEELEMM RRRLEEIEVE FRRSNGGSVD ETSGFAKRLR 60
61 SLYSDDDPGM VKSMDLDMGD PEPVKQVWGA VSHQSSNTIS SNFTNLLQPK PSENMLTQMY 120
121 PDRVCLSTVF EEEEVEEEEE KVIVEDKSIC LITTPMPSLN SEGLGKENCF NGADDKESAS 180
181 SRRLRIQNIF TLCGNQRELS QHSGQEEDQA NIASPDKKDN QFFSITNKAE ALAVEEAKEN 240
241 NISVDQRENG QLDIYVKWET AADNPRKLIT TLRVTKDATL ADLRKLIEIY LGSDNQAFTF 300
301 LKLGEPCGAQ VAKEKESTVQ ATSLPLCNGH AYLATLRPGK SSQHKSLQPA SPLPLNPIEN 360
361 MMEVTPISKV TPNHQVDEFS SPNLVAHLSS TPFITLRRH
|
| Detection Method: | |
| Confidence: | 10.221849 |
| Match: | 1i84S |
| Description: | Heavy meromyosin subfragment |
Matching Structure (courtesy of the PDB): |
|
