| Protein: | XPO1A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 1075 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for XPO1A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
955.0 | [0..1] | [1075..1] |
|
Region A: Residues: [1-886] |
1 11 21 31 41 51
| | | | | |
1 MAAEKLRDLS QPIDVGVLDA TVAAFFVTGS KEERAAADQI LRDLQANPDM WLQVVHILQN 60
61 TNSLDTKFFA LQVLEGVIKY RWNALPVEQR DGMKNYISEV IVQLSSNEAS FRSERLYVNK 120
121 LNVILVQIVK HDWPAKWTSF IPDLVAAAKT SETICENCMA ILKLLSEEVF DFSRGEMTQQ 180
181 KIKELKQSLN SEFKLIHELC LYVLSASQRQ DLIRATLSAL HAYLSWIPLG YIFESTLLET 240
241 LLKFFPVPAY RNLTIQCLTE VAALNFGDFY NVQYVKMYTI FIGQLRIILP PSTKIPEAYS 300
301 SGSGEEQAFI QNLALFFTSF FKFHIRVLES TPEVVSLLLA GLEYLINISY VDDTEVFKVC 360
361 LDYWNSLVLE LFDAHHNSDN PAVSASLMGL QPFLPGMVDG LGSQVMQRRQ LYSHPMSKLR 420
421 GLMINRMAKP EEVLIVEDEN GNIVRETMKD NDVLVQYKIM RETLIYLSHL DHDDTEKQML 480
481 RKLNKQLSGE EWAWNNLNTL CWAIGSISGS MAEDQENRFL VMVIRDLLNL CEITKGKDNK 540
541 AVIASNIMYV VGQYPRFLRA HWKFLKTVVN KLFEFMHETH PGVQDMACDT FLKIVQKCKR 600
601 KFVIVQVGEN EPFVSELLTG LATTVQDLEP HQIHSFYESV GNMIQAESDP QKRDEYLQRL 660
661 MALPNQKWAE IIGQARHSVE FLKDQVVIRT VLNILQTNTS AATSLGTYFL SQISLIFLDM 720
721 LNVYRMYSEL VSTNITEGGP YASKTSFVKL LRSVKRETLK LIETFLDKAE DQPHIGKQFV 780
781 PPMMESVLGD YARNVPDARE SEVLSLFATI INKYKATMLD DVPHIFEAVF QCTLEMITKN 840
841 FEDYPEHRLK FFSLLRAIAT FCFPALIKLS SPQLKLVMDS IIWAFR
|
| Detection Method: |  |
| Confidence: | 91.09691 |
| Match: | 1qbkB |
| Description: | Karyopherin beta2 |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| protein transporter activity | 4.58709163830613 | bayes_pls_golite062009 |
| nuclear export signal receptor activity | 3.48172991171337 | bayes_pls_golite062009 |
| binding | 3.0667965351474 | bayes_pls_golite062009 |
| structural molecule activity | 2.87774614675757 | bayes_pls_golite062009 |
| protein transmembrane transporter activity | 2.74547353635661 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 2.61566088685247 | bayes_pls_golite062009 |
| transporter activity | 2.48700774379895 | bayes_pls_golite062009 |
| nucleic acid binding | 2.34284977509828 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.26725422172281 | bayes_pls_golite062009 |
| signal sequence binding | 2.11631489628537 | bayes_pls_golite062009 |
| RNA binding | 1.98024495780436 | bayes_pls_golite062009 |
| nuclear localization sequence binding | 1.91487015967262 | bayes_pls_golite062009 |
| actin binding | 1.76244772281676 | bayes_pls_golite062009 |
| transcription regulator activity | 1.76231475025891 | bayes_pls_golite062009 |
| protein binding | 1.73688475473996 | bayes_pls_golite062009 |
| mRNA binding | 1.71342954033223 | bayes_pls_golite062009 |
| DNA binding | 1.62032607987786 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.28481004323799 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.09652988954158 | bayes_pls_golite062009 |
| transcription factor activity | 0.923253759652909 | bayes_pls_golite062009 |
| translation initiation factor activity | 0.83079633551839 | bayes_pls_golite062009 |
| translation regulator activity | 0.82193201542158 | bayes_pls_golite062009 |
| translation factor activity, nucleic acid binding | 0.803700928110921 | bayes_pls_golite062009 |
| molecular transducer activity | 0.662662274021266 | bayes_pls_golite062009 |
| signal transducer activity | 0.662662274021266 | bayes_pls_golite062009 |
| hydrolase activity | 0.42501390959416 | bayes_pls_golite062009 |
| importin-alpha export receptor activity | 0.259676026705859 | bayes_pls_golite062009 |
| active transmembrane transporter activity | 0.252495966234234 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.248585912061178 | bayes_pls_golite062009 |
| primary active transmembrane transporter activity | 0.226380819487924 | bayes_pls_golite062009 |
| P-P-bond-hydrolysis-driven transmembrane transporter activity | 0.217517113570989 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, catalyzing transmembrane movement of substances | 0.178770060806735 | bayes_pls_golite062009 |
| ATPase activity, coupled to movement of substances | 0.175241020572885 | bayes_pls_golite062009 |
| ATPase activity, coupled to transmembrane movement of substances | 0.174922130116569 | bayes_pls_golite062009 |
| protein phosphatase binding | 0.11022839198649 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.100181463251306 | bayes_pls_golite062009 |
| pyrophosphatase activity | 0.0635404099346928 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.0548082069333885 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.052195223119721 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.0405268469927988 | bayes_pls_golite062009 |
| transcription activator activity | 0.0232727461674547 | bayes_pls_golite062009 |
|
Region A: Residues: [887-1075] |
1 11 21 31 41 51
| | | | | |
1 HTERNIAETG LNLLLEMLKN FQQSEFCNQF YRSYFMQIEQ EIFAVLTDTF HKPGFKLHVL 60
61 VLQQLFCLPE SGALTEPLWD ATTVPYPYPD NVAFVREYTI KLLSSSFPNM TAAEVTQFVN 120
121 GLYESRNDPS GFKNNIRDFL VQSKEFSAQD NKDLYAEEAA AQRERERQRM LSIPGLIAPN 180
181 EIQDEMVDS
|
| Detection Method: | |
| Confidence: | 106.0 |
| Match: | 1w9cA |
| Description: | Proteolytic fragment of CRM1 spanning six C-terminal HEAT repeats |
Matching Structure (courtesy of the PDB): |
|
