| Protein: | CDC6A_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 539 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for CDC6A_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
296.0 | [0..1] | [539..1] |
|
Region A: Residues: [1-539] |
1 11 21 31 41 51
| | | | | |
1 MPAIAGPSSS PQKHVVGSRS ESIGGVRSAE VNTSRKRKLI SDSAAEVSAT VVLPVNSIST 60
61 PMKWKSPRRC AVSIPKTSDE EIKEDSNEKL ENPVISVCLE VKSKWNPKDD EQMKAVKEAL 120
121 HVSKAPSTVV CREDEQRRVF EFVKGCMEQK KAGSLYICGC PGTGKSLSME KVRLQAEEWA 180
181 KQAGLHCPET VSVNCTSLTK STDIFSKILG NYESGKKANG SFSPLQQLQR LFSQKQQQSR 240
241 SKMMLIIADE MDYLITRDRG VLHELFMLTT LPLSRCILIG TVFCVINVHF LKSVSYGQTS 300
301 FKFKVRICPP GVANAIDLAD RFLPKLKSLN CKPLVVTFRA YSKDQILRIL QERLVALPFV 360
361 AFQSNALEIC ARKVSAASGD MRKALCVCRS ALEILEIEVR GSIDQEPKGP VPECQVVKMD 420
421 HMIAALSKTF KSPIVDTIQS LPQHQQIIVC SAAKAFRGSK KDRTIAELNK LYLEICKSSM 480
481 ITPAGITEFS NMCTVLNDQG ILKLSLARDD KLKRVSLRVD EADITFALKE IRFFRNCLL
|
| Detection Method: |  |
| Confidence: | 48.0 |
| Match: | 1qvrA |
| Description: | Crystal Structure Analysis of ClpB |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| general RNA polymerase II transcription factor activity | 2.66107861968804 | bayes_pls_golite062009 |
| binding | 2.64537357529343 | bayes_pls_golite062009 |
| nucleic acid binding | 2.51683451033161 | bayes_pls_golite062009 |
| DNA binding | 2.12258000781149 | bayes_pls_golite062009 |
| transcription regulator activity | 2.09345198747025 | bayes_pls_golite062009 |
| pyrophosphatase activity | 2.04806869603661 | bayes_pls_golite062009 |
| helicase activity | 1.70242731830224 | bayes_pls_golite062009 |
| DNA-dependent ATPase activity | 1.2155186842031 | bayes_pls_golite062009 |
| purine NTP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent helicase activity | 1.19311444180077 | bayes_pls_golite062009 |
| ATP-dependent DNA helicase activity | 1.18669029764243 | bayes_pls_golite062009 |
| histone acetyltransferase activity | 1.05990253628867 | bayes_pls_golite062009 |
| lysine N-acetyltransferase activity | 1.05990253628867 | bayes_pls_golite062009 |
| protein-DNA loading ATPase activity | 1.00391607739958 | bayes_pls_golite062009 |
| catalytic activity | 1.00104173493322 | bayes_pls_golite062009 |
| DNA clamp loader activity | 0.97898060782084 | bayes_pls_golite062009 |
| transcription factor activity | 0.887108427603557 | bayes_pls_golite062009 |
| transcription repressor activity | 0.862685397469217 | bayes_pls_golite062009 |
| DNA polymerase activity | 0.795745617990735 | bayes_pls_golite062009 |
| structure-specific DNA binding | 0.782430219754236 | bayes_pls_golite062009 |
| telomeric DNA binding | 0.78033069503386 | bayes_pls_golite062009 |
| DNA-directed DNA polymerase activity | 0.771854032852428 | bayes_pls_golite062009 |
| DNA helicase activity | 0.72881469450553 | bayes_pls_golite062009 |
| microtubule motor activity | 0.71686176785564 | bayes_pls_golite062009 |
| double-stranded DNA binding | 0.6071273686445 | bayes_pls_golite062009 |
| motor activity | 0.50661339105747 | bayes_pls_golite062009 |
| DNA replication origin binding | 0.505079230166616 | bayes_pls_golite062009 |
| nucleotidyltransferase activity | 0.367559137329714 | bayes_pls_golite062009 |
| RNA helicase activity | 0.18426050934025 | bayes_pls_golite062009 |
| protein binding | 0.170837278876362 | bayes_pls_golite062009 |
| RNA-dependent ATPase activity | 0.14606996093053 | bayes_pls_golite062009 |
| ATP-dependent RNA helicase activity | 0.13050483816765 | bayes_pls_golite062009 |
| nucleotide binding | 0.114848452385726 | bayes_pls_golite062009 |
| purine nucleotide binding | 0.10713474095071 | bayes_pls_golite062009 |
| purine ribonucleotide binding | 0.0916519414118148 | bayes_pls_golite062009 |
| ribonucleotide binding | 0.0915913646217636 | bayes_pls_golite062009 |
| nucleoside-triphosphatase activity | 0.0530667986761242 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides | 0.028470639373934 | bayes_pls_golite062009 |
| hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | 0.0265151533232588 | bayes_pls_golite062009 |
